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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02125 and LRK55_RS02130 overlap by 4 nucleotides
LRK55_RS02130 and LRK55_RS02135 are separated by 13 nucleotides
LRK55_RS02135 and LRK55_RS02140 are separated by 19 nucleotides
LRK55_RS02140 and LRK55_RS02145 are separated by 3 nucleotides
LRK55_RS02125: LRK55_RS02125 - glutamate-5-semialdehyde dehydrogenase, at 464,790 to 466,052
_RS02125
LRK55_RS02130: LRK55_RS02130 - glutamate 5-kinase, at 466,049 to 467,236
_RS02130
LRK55_RS02135: LRK55_RS02135 - argininosuccinate lyase, at 467,250 to 468,545
_RS02135
LRK55_RS02140: LRK55_RS02140 - N-acetyl-gamma-glutamyl-phosphate reductase, at 468,565 to 469,518
_RS02140
LRK55_RS02145: LRK55_RS02145 - acetylglutamate kinase, at 469,522 to 470,841
_RS02145
Group
Condition
LRK55
_RS02125
LRK55
_RS02130
LRK55
_RS02135
LRK55
_RS02140
LRK55
_RS02145
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
+0.5
-3.1
-1.3
-0.4
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.3
-1.3
-1.1
-1.1
no stress control
no stress control
+0.1
+0.1
-1.7
-1.5
-0.7
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
-1.1
-0.9
-1.4
pH
R2A_PIPES pH 4.5
-0.4
+0.2
-1.8
-0.8
-0.7
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.1
-1.5
-0.9
-0.9
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.2
-1.4
-0.8
-1.1
no stress control
no stress control
-0.1
-0.2
-0.9
-0.7
-1.4
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
+0.0
-1.3
-0.9
-1.0
no stress control
no stress control
+0.1
-0.1
-1.1
-0.6
-1.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
+0.0
-1.4
-0.5
-0.9
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.3
-1.3
-0.6
-0.9
pH
R2A_PIPES pH 4.25
-0.1
+0.1
-0.7
-0.6
-1.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.2
-0.7
-0.8
-1.0
no stress control
no stress control
+0.0
+0.0
-1.2
-0.4
-1.0
pH
R2A_PIPES pH 4.5
+0.0
+0.0
-1.3
-0.5
-0.8
pH
R2A_PIPES pH 4.25
+0.6
-0.1
-2.4
-0.1
-0.5
no stress control
no stress control
+0.0
+0.1
-1.1
-0.5
-0.7
no stress control
no stress control
-0.0
-0.1
-1.1
-0.3
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.5
-1.6
-0.2
-1.0
no stress control
no stress control
+0.2
+0.2
-0.9
-0.7
-0.6
stress
R2A with Zinc chloride 2560 uM
+0.6
-0.4
-0.7
-0.5
-0.9
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
+0.2
-0.5
-0.2
-0.9
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