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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS02050 and LRK55_RS02055 overlap by 4 nucleotides
LRK55_RS02055 and LRK55_RS02060 are separated by 56 nucleotides
LRK55_RS02060 and LRK55_RS02065 are separated by 9 nucleotides
LRK55_RS02065 and LRK55_RS02070 are separated by 10 nucleotides
LRK55_RS02050: LRK55_RS02050 - NUDIX domain-containing protein, at 451,573 to 452,049
_RS02050
LRK55_RS02055: LRK55_RS02055 - glutathione S-transferase family protein, at 452,046 to 452,681
_RS02055
LRK55_RS02060: LRK55_RS02060 - GNAT family N-acetyltransferase, at 452,738 to 453,226
_RS02060
LRK55_RS02065: LRK55_RS02065 - YdeI/OmpD-associated family protein, at 453,236 to 453,838
_RS02065
LRK55_RS02070: LRK55_RS02070 - GNAT family N-acetyltransferase, at 453,849 to 454,412
_RS02070
Group
Condition
LRK55
_RS02050
LRK55
_RS02055
LRK55
_RS02060
LRK55
_RS02065
LRK55
_RS02070
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.6
+0.0
-0.0
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.3
-0.3
+0.1
+0.0
+0.1
no stress control
no stress control
-0.0
-0.3
-0.1
+0.2
+0.0
no stress control
no stress control
-0.0
+0.2
-0.2
-0.3
+0.1
no stress control
no stress control
+0.0
-0.1
-0.2
+0.4
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.2
-0.1
-0.0
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.2
+0.0
+0.1
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
-0.1
-0.0
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
+0.3
-0.0
-0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.2
+0.1
+0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
+0.2
+0.0
+0.1
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.0
+0.1
+0.1
-0.1
no stress control
no stress control
+0.3
-0.1
-0.0
+0.3
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
+0.3
+0.2
-0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
+0.2
-0.2
+0.4
-0.0
no stress control
no stress control
+0.1
+0.2
-0.1
+0.2
+0.0
no stress control
no stress control
+0.0
+0.2
+0.0
+0.1
+0.1
pH
R2A_PIPES pH 4.5
+0.2
+0.1
-0.0
+0.2
+0.2
pH
R2A_PIPES pH 4.25
-0.2
+0.5
+0.4
-0.2
+0.4
pH
R2A_PIPES pH 4.5
+0.1
+0.0
+0.3
+0.2
+0.1
no stress control
no stress control
+0.3
-0.1
-0.3
+0.6
+0.3
pH
R2A_PIPES pH 4.25
+0.2
-0.2
+0.2
+0.3
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
+0.4
+0.0
+0.1
+0.2
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