Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS01615 and LRK55_RS01620 overlap by 4 nucleotidesLRK55_RS01620 and LRK55_RS01625 are separated by 176 nucleotidesLRK55_RS01625 and LRK55_RS01630 are separated by 14 nucleotidesLRK55_RS01630 and LRK55_RS01635 overlap by 8 nucleotides LRK55_RS01615: LRK55_RS01615 - HAD family phosphatase, at 342,470 to 343,099 _RS01615 LRK55_RS01620: LRK55_RS01620 - MFS transporter, at 343,096 to 344,259 _RS01620 LRK55_RS01625: LRK55_RS01625 - methionine--tRNA ligase, at 344,436 to 346,538 _RS01625 LRK55_RS01630: LRK55_RS01630 - DUF2007 domain-containing protein, at 346,553 to 347,008 _RS01630 LRK55_RS01635: LRK55_RS01635 - RnfABCDGE type electron transport complex subunit B, at 347,001 to 347,615 _RS01635
Group Condition LRK55_RS01615 LRK55_RS01620 LRK55_RS01625 LRK55_RS01630 LRK55_RS01635
no stress control no stress control -0.1 +0.1 N.D. +0.0 -2.1
no stress control no stress control +0.2 -0.3 N.D. -0.4 -1.2
stress R2A_PIPES with Cadmium chloride 64 uM -0.9 -0.3 N.D. -0.4 +0.3
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 -0.1 N.D. -0.2 -0.7
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 +0.2 N.D. +0.1 -1.4
stress R2A with Nickel (II) chloride 1696 uM +0.1 +0.2 N.D. -0.2 -1.1
pH R2A_PIPES pH 4.25 +0.1 -0.3 N.D. -0.6 -0.0
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.3 -0.4 N.D. -0.0 -0.6
no stress control no stress control -0.1 -0.5 N.D. -0.1 +0.0
no stress control no stress control -0.1 -0.2 N.D. +0.0 -0.3
no stress control no stress control -0.1 -0.0 N.D. -0.2 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 -0.0 N.D. +0.0 -0.6
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 -0.1 N.D. -0.0 -0.0
no stress control no stress control +0.1 -0.1 N.D. -0.0 -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 -0.1 N.D. -0.3 +0.2
stress R2A with Nickel (II) chloride 1696 uM -0.0 -0.0 N.D. +0.1 -0.0
stress R2A_PIPES with Cadmium chloride 64 uM +0.0 -0.1 N.D. +0.1 -0.0
pH R2A_PIPES pH 4.5 +0.1 -0.1 N.D. +0.0 +0.0
stress R2A with Zinc chloride 2560 uM +0.1 +0.1 N.D. -0.0 +0.0
pH R2A_PIPES pH 4.25 +0.0 +0.3 N.D. +0.0 -0.0
stress R2A with Zinc chloride 2560 uM +0.0 -0.0 N.D. +0.1 +0.2
pH R2A_PIPES pH 4.5 +0.2 +0.2 N.D. +0.1 -0.2
no stress control no stress control +0.1 +0.1 N.D. +0.2 +0.1
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