Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS01570 and LRK55_RS01575 are separated by 68 nucleotidesLRK55_RS01575 and LRK55_RS01580 are separated by 95 nucleotidesLRK55_RS01580 and LRK55_RS01585 are separated by 181 nucleotidesLRK55_RS01585 and LRK55_RS01590 overlap by 4 nucleotides LRK55_RS01570: LRK55_RS01570 - HIT family protein, at 335,092 to 335,508 _RS01570 LRK55_RS01575: LRK55_RS01575 - hypothetical protein, at 335,577 to 336,071 _RS01575 LRK55_RS01580: LRK55_RS01580 - dCTP deaminase, at 336,167 to 336,733 _RS01580 LRK55_RS01585: LRK55_RS01585 - NADPH-dependent FMN reductase, at 336,915 to 337,460 _RS01585 LRK55_RS01590: LRK55_RS01590 - iron-sulfur cluster carrier protein ApbC, at 337,457 to 338,551 _RS01590
Group Condition LRK55_RS01570 LRK55_RS01575 LRK55_RS01580 LRK55_RS01585 LRK55_RS01590
pH R2A_PIPES pH 4.25 N.D. -2.3 -0.7 +0.1 N.D.
pH R2A_PIPES pH 4.25 N.D. -1.9 -0.9 +0.2 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.1 -1.4 -0.2 N.D.
stress R2A with Zinc chloride 2560 uM N.D. -1.2 -0.2 -0.2 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -1.0 -0.3 -0.2 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.0 -1.2 -0.0 N.D.
pH R2A_PIPES pH 4.5 N.D. -0.8 -0.1 -0.2 N.D.
pH R2A_PIPES pH 4.5 N.D. -0.8 -0.1 -0.1 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. -1.0 -0.1 +0.1 N.D.
stress R2A with Zinc chloride 2560 uM N.D. -0.9 +0.1 -0.1 N.D.
no stress control no stress control N.D. -0.3 -0.1 -0.4 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. -0.5 +0.0 -0.2 N.D.
no stress control no stress control N.D. -0.2 -0.3 -0.2 N.D.
no stress control no stress control N.D. -0.2 -0.3 -0.2 N.D.
no stress control no stress control N.D. -0.3 -0.1 -0.1 N.D.
no stress control no stress control N.D. -0.2 -0.2 +0.1 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.2 +0.1 -0.1 N.D.
no stress control no stress control N.D. -0.2 +0.1 +0.0 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.2 +0.1 +0.2 N.D.
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.2 +0.2 -0.0 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. -0.3 +0.2 +0.1 N.D.
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.0 +0.3 -0.1 N.D.
no stress control no stress control N.D. -0.0 +0.2 +0.1 N.D.
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