Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS01350 and LRK55_RS01355 are separated by 65 nucleotidesLRK55_RS01355 and LRK55_RS01360 are separated by 19 nucleotidesLRK55_RS01360 and LRK55_RS01365 are separated by 97 nucleotidesLRK55_RS01365 and LRK55_RS01370 overlap by 4 nucleotides LRK55_RS01350: LRK55_RS01350 - LytTR family DNA-binding domain-containing protein, at 294,691 to 295,560 _RS01350 LRK55_RS01355: LRK55_RS01355 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE, at 295,626 to 296,258 _RS01355 LRK55_RS01360: LRK55_RS01360 - imidazole glycerol phosphate synthase subunit HisF, at 296,278 to 297,048 _RS01360 LRK55_RS01365: LRK55_RS01365 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase, at 297,146 to 297,874 _RS01365 LRK55_RS01370: LRK55_RS01370 - imidazole glycerol phosphate synthase subunit HisH, at 297,871 to 298,461 _RS01370
Group Condition LRK55_RS01350 LRK55_RS01355 LRK55_RS01360 LRK55_RS01365 LRK55_RS01370
stress R2A with Nickel (II) chloride 1696 uM -0.5 -0.1 -1.7 -0.9 -1.3
stress R2A with Nickel (II) chloride 1696 uM -0.0 -0.1 -1.7 -0.7 -0.7
no stress control no stress control -0.8 +0.0 -0.4 -0.4 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.4 +0.2 -0.9 -0.3 -0.2
no stress control no stress control -0.3 -0.1 -0.1 -0.2 -0.7
pH R2A_PIPES pH 4.5 -0.3 +0.1 -0.5 -0.4 -0.3
no stress control no stress control -0.1 +0.1 -0.3 -0.1 -0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.4 +0.2 +0.1 +0.1 -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 +0.3 -0.1 -0.3 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 +0.1 -0.2 -0.3 +0.1
no stress control no stress control +0.1 -0.2 -0.3 +0.2 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.3 +0.1 -0.0 +0.1 +0.1
pH R2A_PIPES pH 4.5 +0.2 +0.2 +0.0 -0.1 -0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 -0.0 -0.2 +0.2 +0.0
no stress control no stress control -0.2 +0.3 +0.0 +0.1 +0.1
no stress control no stress control -0.2 -0.1 +0.4 +0.1 +0.3
no stress control no stress control -0.1 +0.2 +0.1 +0.3 +0.0
stress R2A with Zinc chloride 2560 uM -0.6 +0.6 -0.3 +0.8 +0.7
pH R2A_PIPES pH 4.25 -0.1 +0.3 +0.3 +0.4 +0.3
stress R2A with Zinc chloride 2560 uM -0.2 +0.8 -0.7 +0.8 +0.8
stress R2A_PIPES with Cadmium chloride 64 uM -0.6 +0.8 +0.2 +0.9 +0.5
pH R2A_PIPES pH 4.25 -0.3 +0.3 +0.7 +0.5 +0.9
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 +0.8 +0.9 +1.0 +0.9
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