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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS01315 and LRK55_RS01320 are separated by 389 nucleotides
LRK55_RS01320 and LRK55_RS01325 are separated by 165 nucleotides
LRK55_RS01325 and LRK55_RS01330 overlap by 4 nucleotides
LRK55_RS01330 and LRK55_RS01335 are separated by 50 nucleotides
LRK55_RS01315: LRK55_RS01315 - amino acid permease, at 287,352 to 288,836
_RS01315
LRK55_RS01320: LRK55_RS01320 - high-potential iron-sulfur protein, at 289,226 to 289,558
_RS01320
LRK55_RS01325: LRK55_RS01325 - methylthioribulose 1-phosphate dehydratase, at 289,724 to 290,374
_RS01325
LRK55_RS01330: LRK55_RS01330 - acireductone dioxygenase, at 290,371 to 290,922
_RS01330
LRK55_RS01335: LRK55_RS01335 - acireductone synthase, at 290,973 to 291,659
_RS01335
Group
Condition
LRK55
_RS01315
LRK55
_RS01320
LRK55
_RS01325
LRK55
_RS01330
LRK55
_RS01335
pH
R2A_PIPES pH 4.5
-0.1
+0.0
-1.0
+0.1
N.D.
no stress control
no stress control
+0.1
+0.1
-0.2
-0.8
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
-0.7
-0.6
+0.3
N.D.
pH
R2A_PIPES pH 4.5
-0.2
-0.2
-0.8
+0.6
N.D.
no stress control
no stress control
+0.1
-0.4
-0.1
-0.2
N.D.
no stress control
no stress control
+0.1
-0.2
-0.2
-0.2
N.D.
no stress control
no stress control
+0.1
-0.3
-0.1
-0.2
N.D.
no stress control
no stress control
+0.2
-0.1
-0.1
-0.2
N.D.
no stress control
no stress control
+0.3
+0.3
-0.4
-0.2
N.D.
no stress control
no stress control
+0.2
-0.1
-0.2
-0.0
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
-0.1
-0.4
+0.0
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.4
-0.2
-0.5
+0.5
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
-0.0
-0.6
+0.6
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
-0.1
-0.3
+0.3
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.2
-0.3
+0.2
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.4
+0.4
-0.1
-0.3
N.D.
pH
R2A_PIPES pH 4.25
+0.7
+0.5
-1.3
+0.6
N.D.
pH
R2A_PIPES pH 4.25
+0.6
+0.2
-1.2
+0.9
N.D.
stress
R2A with Zinc chloride 2560 uM
+0.3
-0.1
-0.0
+0.2
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
+0.3
-0.5
+0.6
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.4
+0.2
-0.5
+0.6
N.D.
stress
R2A with Zinc chloride 2560 uM
+0.5
+0.3
-0.1
+0.5
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.5
+0.0
-0.1
+0.9
N.D.
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