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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS01285 and LRK55_RS01290 are separated by 331 nucleotides
LRK55_RS01290 and LRK55_RS01295 are separated by 313 nucleotides
LRK55_RS01295 and LRK55_RS01300 are separated by 48 nucleotides
LRK55_RS01300 and LRK55_RS01305 are separated by 18 nucleotides
LRK55_RS01285: LRK55_RS01285 - ABC transporter ATP-binding protein, at 279,022 to 280,869
_RS01285
LRK55_RS01290: LRK55_RS01290 - hypothetical protein, at 281,201 to 282,283
_RS01290
LRK55_RS01295: LRK55_RS01295 - DNA topoisomerase IV subunit B, at 282,597 to 284,486
_RS01295
LRK55_RS01300: LRK55_RS01300 - 3-hydroxyanthranilate 3,4-dioxygenase, at 284,535 to 285,056
_RS01300
LRK55_RS01305: LRK55_RS01305 - NUDIX hydrolase, at 285,075 to 285,626
_RS01305
Group
Condition
LRK55
_RS01285
LRK55
_RS01290
LRK55
_RS01295
LRK55
_RS01300
LRK55
_RS01305
pH
R2A_PIPES pH 4.25
-0.1
-0.4
N.D.
-1.7
-1.3
pH
R2A_PIPES pH 4.25
-0.2
-0.2
N.D.
-0.1
-1.6
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
-0.2
N.D.
-0.5
-0.7
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.1
N.D.
-0.4
-0.8
pH
R2A_PIPES pH 4.5
-0.2
-0.1
N.D.
-0.4
-0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.2
N.D.
-0.5
-0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.0
N.D.
-0.5
-0.6
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.2
N.D.
-0.2
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.0
N.D.
-0.0
-1.0
no stress control
no stress control
-0.3
-0.2
N.D.
-0.2
-0.4
stress
R2A with Zinc chloride 2560 uM
-0.1
-0.1
N.D.
-0.4
-0.5
no stress control
no stress control
+0.0
+0.0
N.D.
-0.6
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-0.2
N.D.
-0.3
-0.3
no stress control
no stress control
-0.1
-0.1
N.D.
-0.2
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.1
N.D.
-0.0
-0.6
no stress control
no stress control
-0.1
-0.1
N.D.
-0.3
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.1
N.D.
-0.3
+0.0
no stress control
no stress control
-0.2
-0.0
N.D.
+0.1
-0.5
pH
R2A_PIPES pH 4.5
-0.1
-0.1
N.D.
-0.4
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-0.1
N.D.
-0.0
+0.1
no stress control
no stress control
-0.2
+0.0
N.D.
+0.1
-0.1
no stress control
no stress control
-0.2
-0.2
N.D.
+0.1
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.0
N.D.
-0.0
+0.6
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