Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS01030 and LRK55_RS01040 are separated by 224 nucleotidesLRK55_RS01040 and LRK55_RS01045 are separated by 94 nucleotidesLRK55_RS01045 and LRK55_RS01050 overlap by 4 nucleotidesLRK55_RS01050 and LRK55_RS01055 are separated by 34 nucleotides LRK55_RS01030: LRK55_RS01030 - DNA polymerase III subunit gamma/tau, at 224,633 to 226,318 _RS01030 LRK55_RS01040: LRK55_RS01040 - tRNA-Ser, at 226,543 to 226,635 _RS01040 LRK55_RS01045: LRK55_RS01045 - MBL fold metallo-hydrolase, at 226,730 to 227,488 _RS01045 LRK55_RS01050: LRK55_RS01050 - 3-deoxy-D-manno-octulosonic acid kinase, at 227,485 to 228,216 _RS01050 LRK55_RS01055: LRK55_RS01055 - glycosyltransferase family 9 protein, at 228,251 to 229,294 _RS01055
Group Condition LRK55_RS01030 LRK55_RS01040 LRK55_RS01045 LRK55_RS01050 LRK55_RS01055
pH R2A_PIPES pH 4.25 N.D. N.D. -2.4 -1.6 -3.6
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. -3.2 -2.3 -1.4
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. -2.8 -2.0 -1.4
pH R2A_PIPES pH 4.25 N.D. N.D. -2.0 -1.9 -2.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. -3.6 -1.7 -0.5
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. -2.9 -1.9 -0.3
stress R2A with Zinc chloride 2560 uM N.D. N.D. -2.6 -1.9 -0.3
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. -2.8 -1.1 -0.6
pH R2A_PIPES pH 4.5 N.D. N.D. -2.2 -2.2 -0.3
no stress control no stress control N.D. N.D. -3.2 -1.1 -0.1
stress R2A with Zinc chloride 2560 uM N.D. N.D. -3.4 -0.7 -0.3
pH R2A_PIPES pH 4.5 N.D. N.D. -2.5 -1.7 -0.2
no stress control no stress control N.D. N.D. -3.2 -0.7 -0.4
no stress control no stress control N.D. N.D. -3.5 -0.6 -0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. -2.9 -1.1 -0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. -3.3 -0.9 -0.0
no stress control no stress control N.D. N.D. -2.9 -1.1 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. -3.2 -0.8 +0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. -2.6 -1.2 -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. -2.8 -0.7 -0.1
no stress control no stress control N.D. N.D. -2.6 -0.8 -0.1
no stress control no stress control N.D. N.D. -2.7 -0.7 -0.1
no stress control no stress control N.D. N.D. -2.1 -0.5 -0.2
remove
LRK55_RS01030
plot
remove
LRK55_RS01040
plot
remove
LRK55_RS01045
remove
LRK55_RS01050
plot
remove
LRK55_RS01055
plot