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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS01015 and LRK55_RS01020 are separated by 19 nucleotides
LRK55_RS01020 and LRK55_RS01025 are separated by 109 nucleotides
LRK55_RS01025 and LRK55_RS01030 overlap by 1 nucleotides
LRK55_RS01030 and LRK55_RS01040 are separated by 224 nucleotides
LRK55_RS01015: LRK55_RS01015 - histidine triad nucleotide-binding protein, at 223,237 to 223,581
_RS01015
LRK55_RS01020: LRK55_RS01020 - recombination mediator RecR, at 223,601 to 224,200
_RS01020
LRK55_RS01025: LRK55_RS01025 - YbaB/EbfC family nucleoid-associated protein, at 224,310 to 224,633
_RS01025
LRK55_RS01030: LRK55_RS01030 - DNA polymerase III subunit gamma/tau, at 224,633 to 226,318
_RS01030
LRK55_RS01040: LRK55_RS01040 - tRNA-Ser, at 226,543 to 226,635
_RS01040
Group
Condition
LRK55
_RS01015
LRK55
_RS01020
LRK55
_RS01025
LRK55
_RS01030
LRK55
_RS01040
pH
R2A_PIPES pH 4.5
-0.0
-0.7
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.6
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
-0.7
N.D.
N.D.
N.D.
no stress control
no stress control
-0.2
-0.3
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.7
N.D.
N.D.
N.D.
no stress control
no stress control
-0.2
-0.3
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
-0.4
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
-0.1
-0.4
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
-0.4
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
-0.1
-0.4
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.4
N.D.
N.D.
N.D.
no stress control
no stress control
-0.2
-0.2
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
+0.0
-0.3
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
-0.3
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
-0.1
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
+0.2
-0.2
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
-0.1
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
-0.2
N.D.
N.D.
N.D.
no stress control
no stress control
+0.3
-0.0
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
+0.3
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.1
+0.6
N.D.
N.D.
N.D.
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