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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00900 and LRK55_RS00905 overlap by 10 nucleotides
LRK55_RS00905 and LRK55_RS00910 are separated by 269 nucleotides
LRK55_RS00910 and LRK55_RS00915 are separated by 118 nucleotides
LRK55_RS00915 and LRK55_RS00920 are separated by 174 nucleotides
LRK55_RS00900: LRK55_RS00900 - NADH-quinone oxidoreductase subunit B, at 201,285 to 201,842
_RS00900
LRK55_RS00905: LRK55_RS00905 - NADH-quinone oxidoreductase subunit A, at 201,833 to 202,189
_RS00905
LRK55_RS00910: LRK55_RS00910 - PilZ domain-containing protein, at 202,459 to 202,812
_RS00910
LRK55_RS00915: LRK55_RS00915 - EAL domain-containing protein, at 202,931 to 205,774
_RS00915
LRK55_RS00920: LRK55_RS00920 - PIG-L family deacetylase, at 205,949 to 206,941
_RS00920
Group
Condition
LRK55
_RS00900
LRK55
_RS00905
LRK55
_RS00910
LRK55
_RS00915
LRK55
_RS00920
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
+0.5
+0.2
-0.0
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+0.1
+0.2
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
+0.5
-0.0
+0.3
no stress control
no stress control
N.D.
N.D.
+1.0
+0.1
-0.3
pH
R2A_PIPES pH 4.5
N.D.
N.D.
+0.4
+0.3
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
+0.9
-0.0
+0.0
no stress control
no stress control
N.D.
N.D.
+1.0
+0.2
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.5
+0.1
+0.4
no stress control
no stress control
N.D.
N.D.
+1.0
+0.1
-0.0
no stress control
no stress control
N.D.
N.D.
+0.9
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
+0.6
+0.1
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
+0.6
+0.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
+0.6
+0.0
+0.6
no stress control
no stress control
N.D.
N.D.
+1.0
+0.2
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
+0.5
+0.2
+0.6
no stress control
no stress control
N.D.
N.D.
+0.9
+0.2
+0.3
no stress control
no stress control
N.D.
N.D.
+1.0
+0.1
+0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
+1.2
+0.3
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+1.0
+0.1
+0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
+0.8
+0.2
+0.7
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
+1.3
+0.3
+0.2
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+1.3
+0.3
+0.7
pH
R2A_PIPES pH 4.25
N.D.
N.D.
+1.3
+0.5
+0.6
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