Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS00790 and LRK55_RS00795 are separated by 12 nucleotidesLRK55_RS00795 and LRK55_RS00800 are separated by 105 nucleotidesLRK55_RS00800 and LRK55_RS00805 are separated by 97 nucleotidesLRK55_RS00805 and LRK55_RS00810 are separated by 167 nucleotides LRK55_RS00790: LRK55_RS00790 - class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC, at 175,547 to 176,614 _RS00790 LRK55_RS00795: LRK55_RS00795 - poly(R)-hydroxyalkanoic acid synthase subunit PhaE, at 176,627 to 177,676 _RS00795 LRK55_RS00800: LRK55_RS00800 - polyribonucleotide nucleotidyltransferase, at 177,782 to 179,887 _RS00800 LRK55_RS00805: LRK55_RS00805 - 30S ribosomal protein S15, at 179,985 to 180,254 _RS00805 LRK55_RS00810: LRK55_RS00810 - tRNA pseudouridine(55) synthase TruB, at 180,422 to 181,348 _RS00810
Group Condition LRK55_RS00790 LRK55_RS00795 LRK55_RS00800 LRK55_RS00805 LRK55_RS00810
stress R2A with Zinc chloride 2560 uM -1.2 -1.0 N.D. N.D. +0.3
stress R2A with Nickel (II) chloride 1696 uM -0.9 -1.0 N.D. N.D. +0.1
stress R2A_PIPES with Cadmium chloride 64 uM -1.2 -0.8 N.D. N.D. +0.1
stress R2A_PIPES with Cadmium chloride 64 uM -1.4 -0.6 N.D. N.D. +0.2
pH R2A_PIPES pH 4.5 -1.3 -1.2 N.D. N.D. +0.7
pH R2A_PIPES pH 4.5 -1.1 -1.2 N.D. N.D. +0.7
stress R2A with Zinc chloride 2560 uM -0.9 -0.9 N.D. N.D. +0.2
stress R2A with Nickel (II) chloride 1696 uM -0.8 -0.9 N.D. N.D. +0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.7 -0.9 N.D. N.D. +0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.6 -0.4 N.D. N.D. +0.5
no stress control no stress control -0.3 -0.4 N.D. N.D. +0.2
no stress control no stress control -0.4 -0.2 N.D. N.D. +0.3
no stress control no stress control -0.4 -0.0 N.D. N.D. +0.3
no stress control no stress control -0.3 -0.2 N.D. N.D. +0.3
no stress control no stress control -0.4 -0.0 N.D. N.D. +0.3
no stress control no stress control -0.2 -0.1 N.D. N.D. +0.2
no stress control no stress control -0.2 -0.0 N.D. N.D. +0.2
pH R2A_PIPES pH 4.25 -0.7 -0.1 N.D. N.D. +1.2
pH R2A_PIPES pH 4.25 -0.5 -0.2 N.D. N.D. +1.3
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.3 +0.1 N.D. N.D. +0.8
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 +0.0 N.D. N.D. +0.8
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 +0.2 N.D. N.D. +0.7
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 +0.5 N.D. N.D. +1.1
remove
LRK55_RS00790
plot		 remove
LRK55_RS00795
plot		 remove
LRK55_RS00800		 remove
LRK55_RS00805
plot		 remove
LRK55_RS00810
plot