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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00680 and LRK55_RS00685 are separated by 69 nucleotides
LRK55_RS00685 and LRK55_RS00690 are separated by 301 nucleotides
LRK55_RS00690 and LRK55_RS00695 are separated by 58 nucleotides
LRK55_RS00695 and LRK55_RS00700 overlap by 4 nucleotides
LRK55_RS00680: LRK55_RS00680 - cysteine synthase A, at 149,159 to 150,097
_RS00680
LRK55_RS00685: LRK55_RS00685 - siroheme synthase CysG, at 150,167 to 151,627
_RS00685
LRK55_RS00690: LRK55_RS00690 - LysR substrate-binding domain-containing protein, at 151,929 to 152,924
_RS00690
LRK55_RS00695: LRK55_RS00695 - phosphoadenylyl-sulfate reductase, at 152,983 to 153,705
_RS00695
LRK55_RS00700: LRK55_RS00700 - assimilatory sulfite reductase (NADPH) hemoprotein subunit, at 153,702 to 155,402
_RS00700
Group
Condition
LRK55
_RS00680
LRK55
_RS00685
LRK55
_RS00690
LRK55
_RS00695
LRK55
_RS00700
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.1
+0.3
+0.1
-0.1
no stress control
no stress control
-0.3
+0.3
-0.2
+0.2
-0.1
no stress control
no stress control
-0.2
-0.2
-0.1
+0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
-0.6
+0.3
+0.2
+0.2
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.2
+0.2
-0.1
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
+0.2
+0.1
+0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.0
+0.2
+0.2
+0.1
no stress control
no stress control
-0.0
-0.1
+0.2
+0.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.1
+0.3
+0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.2
+0.4
+0.2
+0.1
pH
R2A_PIPES pH 4.5
-0.1
+0.3
+0.2
+0.0
+0.1
pH
R2A_PIPES pH 4.25
+0.1
-0.1
+0.2
+0.2
-0.0
no stress control
no stress control
-0.3
+0.2
+0.1
+0.3
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.0
+0.4
+0.2
+0.2
no stress control
no stress control
-0.0
+0.0
+0.2
+0.3
+0.0
no stress control
no stress control
-0.3
+0.3
+0.1
+0.3
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.4
+0.1
+0.6
+0.2
-0.0
no stress control
no stress control
-0.1
+0.2
+0.1
+0.2
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
-0.2
+0.3
+0.3
+0.2
pH
R2A_PIPES pH 4.25
+0.3
-0.2
+0.9
-0.0
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
+0.3
+0.5
+0.2
-0.0
pH
R2A_PIPES pH 4.5
+0.1
+0.5
+0.2
+0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.1
+0.4
+0.3
+0.3
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