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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00595 and LRK55_RS00600 are separated by 161 nucleotides
LRK55_RS00600 and LRK55_RS00605 overlap by 4 nucleotides
LRK55_RS00605 and LRK55_RS00610 are separated by 61 nucleotides
LRK55_RS00610 and LRK55_RS00615 are separated by 112 nucleotides
LRK55_RS00595: LRK55_RS00595 - arsenate reductase (glutaredoxin), at 134,553 to 134,897
_RS00595
LRK55_RS00600: LRK55_RS00600 - amidohydrolase, at 135,059 to 135,880
_RS00600
LRK55_RS00605: LRK55_RS00605 - pyridoxal phosphate-dependent aminotransferase, at 135,877 to 137,016
_RS00605
LRK55_RS00610: LRK55_RS00610 - LysR substrate-binding domain-containing protein, at 137,078 to 138,052
_RS00610
LRK55_RS00615: LRK55_RS00615 - FMN-dependent NADH-azoreductase, at 138,165 to 138,749
_RS00615
Group
Condition
LRK55
_RS00595
LRK55
_RS00600
LRK55
_RS00605
LRK55
_RS00610
LRK55
_RS00615
pH
R2A_PIPES pH 4.25
-0.4
-0.0
-0.4
-0.1
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
+0.0
-0.3
-0.6
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.0
-0.2
-0.5
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.4
-0.0
-0.5
+0.0
+0.1
no stress control
no stress control
-0.3
-0.0
-0.2
-0.3
+0.1
no stress control
no stress control
-0.3
-0.1
-0.2
-0.1
+0.0
no stress control
no stress control
+0.3
-0.1
-0.4
-0.3
-0.0
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.1
-0.2
-0.0
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.4
+0.1
-0.2
+0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.1
-0.1
-0.3
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.4
-0.1
-0.2
-0.4
+0.1
no stress control
no stress control
-0.0
-0.2
-0.1
-0.0
+0.1
no stress control
no stress control
-0.0
+0.1
-0.2
-0.2
+0.1
pH
R2A_PIPES pH 4.5
+0.2
-0.0
-0.3
-0.2
+0.2
pH
R2A_PIPES pH 4.5
-0.1
+0.2
-0.2
-0.1
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.1
-0.1
-0.0
+0.2
no stress control
no stress control
+0.1
+0.0
-0.3
-0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.5
-0.3
+0.2
+0.0
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.1
-0.1
-0.1
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.1
-0.1
-0.1
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
-0.2
-0.2
+0.2
+0.1
no stress control
no stress control
+0.5
-0.1
-0.2
-0.1
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.7
+0.0
-0.1
-0.1
+0.3
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