Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS00545 and LRK55_RS00550 are separated by 149 nucleotidesLRK55_RS00550 and LRK55_RS00555 are separated by 55 nucleotidesLRK55_RS00555 and LRK55_RS00560 are separated by 262 nucleotidesLRK55_RS00560 and LRK55_RS00565 are separated by 74 nucleotides LRK55_RS00545: LRK55_RS00545 - GntP family permease, at 120,152 to 121,549 _RS00545 LRK55_RS00550: LRK55_RS00550 - translational GTPase TypA, at 121,699 to 123,525 _RS00550 LRK55_RS00555: LRK55_RS00555 - LysR family transcriptional regulator, at 123,581 to 124,531 _RS00555 LRK55_RS00560: LRK55_RS00560 - aconitate hydratase AcnA, at 124,794 to 127,535 _RS00560 LRK55_RS00565: LRK55_RS00565 - hypothetical protein, at 127,610 to 128,200 _RS00565
Group Condition LRK55_RS00545 LRK55_RS00550 LRK55_RS00555 LRK55_RS00560 LRK55_RS00565
pH R2A_PIPES pH 4.25 +0.2 -3.1 -0.2 N.D. -0.1
pH R2A_PIPES pH 4.5 +0.4 -3.1 -0.2 N.D. -0.0
no stress control no stress control +0.0 -2.0 -0.7 N.D. -0.2
pH R2A_PIPES pH 4.5 +0.2 -3.0 -0.0 N.D. +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 -2.1 -0.3 N.D. -0.3
pH R2A_PIPES pH 4.25 +0.3 -2.9 +0.1 N.D. -0.2
no stress control no stress control -0.2 -2.2 -0.1 N.D. -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -2.2 -0.0 N.D. -0.5
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 -2.1 -0.4 N.D. -0.2
no stress control no stress control -0.0 -2.0 -0.1 N.D. -0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 -2.1 -0.1 N.D. -0.2
stress R2A_PIPES with Cadmium chloride 64 uM +0.3 -3.0 +0.6 N.D. -0.2
stress R2A with Zinc chloride 2560 uM +0.3 -2.4 -0.1 N.D. +0.1
stress R2A with Zinc chloride 2560 uM +0.1 -2.2 -0.2 N.D. +0.2
no stress control no stress control +0.1 -2.0 -0.1 N.D. +0.0
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -2.3 +0.4 N.D. -0.3
no stress control no stress control +0.1 -1.9 +0.1 N.D. -0.3
stress R2A with Nickel (II) chloride 1696 uM +0.0 -2.0 +0.1 N.D. +0.1
no stress control no stress control +0.1 -1.9 +0.4 N.D. -0.1
no stress control no stress control +0.1 -1.7 +0.1 N.D. +0.1
stress R2A with Nickel (II) chloride 1696 uM -0.0 -1.8 +0.7 N.D. +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.2 -0.3 -0.2 N.D. -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 -0.2 -0.2 N.D. +0.1
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