Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS00490 and LRK55_RS00495 are separated by 95 nucleotidesLRK55_RS00495 and LRK55_RS00500 are separated by 91 nucleotidesLRK55_RS00500 and LRK55_RS00505 are separated by 157 nucleotidesLRK55_RS00505 and LRK55_RS00510 are separated by 39 nucleotides LRK55_RS00490: LRK55_RS00490 - propionate--CoA ligase, at 103,877 to 105,823 _RS00490 LRK55_RS00495: LRK55_RS00495 - malate dehydrogenase, at 105,919 to 106,905 _RS00495 LRK55_RS00500: LRK55_RS00500 - pyridoxal phosphate-dependent aminotransferase, at 106,997 to 108,196 _RS00500 LRK55_RS00505: LRK55_RS00505 - GlsB/YeaQ/YmgE family stress response membrane protein, at 108,354 to 108,608 _RS00505 LRK55_RS00510: LRK55_RS00510 - YidB family protein, at 108,648 to 109,073 _RS00510
Group Condition LRK55_RS00490 LRK55_RS00495 LRK55_RS00500 LRK55_RS00505 LRK55_RS00510
no stress control no stress control -0.2 N.D. +0.2 +0.1 -0.1
stress R2A with Nickel (II) chloride 1696 uM -0.1 N.D. +0.0 +0.2 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 N.D. +0.4 +0.0 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 N.D. +0.5 -0.1 +0.0
stress R2A with Nickel (II) chloride 1696 uM -0.2 N.D. +0.0 +0.1 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 N.D. +0.5 -0.0 -0.1
no stress control no stress control -0.1 N.D. +0.4 +0.1 -0.1
no stress control no stress control -0.1 N.D. +0.2 +0.2 +0.0
no stress control no stress control -0.0 N.D. +0.3 +0.2 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 N.D. +0.5 +0.1 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 N.D. +0.5 +0.2 -0.2
stress R2A with Zinc chloride 2560 uM -0.1 N.D. +0.5 -0.0 +0.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 N.D. +0.5 +0.1 +0.0
no stress control no stress control -0.1 N.D. +0.3 +0.2 +0.1
no stress control no stress control -0.1 N.D. +0.4 +0.0 +0.1
no stress control no stress control -0.1 N.D. +0.3 +0.3 +0.1
pH R2A_PIPES pH 4.5 -0.1 N.D. +0.3 +0.0 +0.4
stress R2A_PIPES with Cadmium chloride 64 uM -0.3 N.D. +1.3 -0.1 -0.2
stress R2A with Zinc chloride 2560 uM -0.1 N.D. +0.4 +0.4 +0.3
pH R2A_PIPES pH 4.5 -0.1 N.D. +0.3 +0.5 +0.4
pH R2A_PIPES pH 4.25 +0.0 N.D. +1.0 +0.3 +0.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.3 N.D. +1.5 +0.5 +0.0
pH R2A_PIPES pH 4.25 +0.1 N.D. +1.0 +0.7 +0.1
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LRK55_RS00490
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LRK55_RS00495
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LRK55_RS00510
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