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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00470 and LRK55_RS00475 are separated by 163 nucleotides
LRK55_RS00475 and LRK55_RS00480 are separated by 181 nucleotides
LRK55_RS00480 and LRK55_RS00485 are separated by 132 nucleotides
LRK55_RS00485 and LRK55_RS00490 are separated by 95 nucleotides
LRK55_RS00470: LRK55_RS00470 - methylisocitrate lyase, at 98,929 to 99,813
_RS00470
LRK55_RS00475: LRK55_RS00475 - dicarboxylate/amino acid:cation symporter, at 99,977 to 101,293
_RS00475
LRK55_RS00480: LRK55_RS00480 - alkyl hydroperoxide reductase subunit C, at 101,475 to 102,038
_RS00480
LRK55_RS00485: LRK55_RS00485 - alkyl hydroperoxide reductase subunit F, at 102,171 to 103,781
_RS00485
LRK55_RS00490: LRK55_RS00490 - propionate--CoA ligase, at 103,877 to 105,823
_RS00490
Group
Condition
LRK55
_RS00470
LRK55
_RS00475
LRK55
_RS00480
LRK55
_RS00485
LRK55
_RS00490
pH
R2A_PIPES pH 4.25
-3.5
+0.1
-3.0
-1.2
+0.0
pH
R2A_PIPES pH 4.25
-3.2
+0.2
-3.3
-1.1
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-3.9
+0.2
-1.8
+0.1
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-4.2
-0.0
-1.0
-0.0
-0.2
pH
R2A_PIPES pH 4.5
-3.5
-0.2
-1.3
-0.2
-0.1
pH
R2A_PIPES pH 4.5
-4.1
-0.0
-0.8
-0.3
-0.1
stress
R2A with Zinc chloride 2560 uM
-4.1
+0.1
-0.9
+0.1
-0.1
stress
R2A with Zinc chloride 2560 uM
-3.4
+0.1
-1.4
+0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-3.9
+0.0
-0.6
-0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-3.4
+0.2
-1.0
+0.0
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-3.0
-0.0
-1.3
+0.1
-0.2
no stress control
no stress control
-3.4
+0.2
-0.9
-0.1
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-2.8
-0.2
-0.8
+0.1
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-3.6
+0.2
-0.4
+0.1
-0.1
no stress control
no stress control
-3.3
+0.2
-0.6
+0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-2.6
+0.1
-1.1
+0.1
-0.2
no stress control
no stress control
-3.2
+0.4
-0.9
+0.1
-0.1
no stress control
no stress control
-3.4
+0.0
-0.4
+0.2
-0.1
no stress control
no stress control
-3.2
+0.0
-0.3
+0.0
-0.2
no stress control
no stress control
-3.2
+0.2
-0.6
+0.1
-0.1
no stress control
no stress control
-3.0
+0.1
-0.3
+0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-2.8
+0.1
-0.2
+0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-2.7
+0.1
+0.2
+0.2
-0.3
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