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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00440 and LRK55_RS00445 are separated by 93 nucleotides
LRK55_RS00445 and LRK55_RS00450 are separated by 365 nucleotides
LRK55_RS00450 and LRK55_RS00455 are separated by 283 nucleotides
LRK55_RS00455 and LRK55_RS00460 are separated by 56 nucleotides
LRK55_RS00440: LRK55_RS00440 - IS4 family transposase, at 91,381 to 92,721
_RS00440
LRK55_RS00445: LRK55_RS00445 - OmpA family protein, at 92,815 to 93,939
_RS00445
LRK55_RS00450: LRK55_RS00450 - bifunctional 2-methylcitrate dehydratase/aconitate hydratase, at 94,305 to 95,756
_RS00450
LRK55_RS00455: LRK55_RS00455 - TerC family protein, at 96,040 to 96,732
_RS00455
LRK55_RS00460: LRK55_RS00460 - hypothetical protein, at 96,789 to 97,274
_RS00460
Group
Condition
LRK55
_RS00440
LRK55
_RS00445
LRK55
_RS00450
LRK55
_RS00455
LRK55
_RS00460
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
-3.8
-3.8
-2.1
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-3.5
-3.7
-1.6
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-3.8
-3.7
-1.6
-0.1
pH
R2A_PIPES pH 4.5
-0.1
-3.5
-3.3
-2.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-3.6
-2.2
-3.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-3.3
-1.9
-2.9
-0.4
no stress control
no stress control
-0.1
-3.3
-3.7
-1.6
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-3.8
-3.8
-1.1
+0.2
stress
R2A with Zinc chloride 2560 uM
-0.1
-4.0
-3.6
-1.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-3.6
-2.3
-2.2
-0.1
no stress control
no stress control
-0.1
-3.7
-3.4
-1.1
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-3.3
-2.0
-2.7
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.1
-3.8
-3.4
-0.9
+0.1
pH
R2A_PIPES pH 4.25
-0.2
-3.1
-3.3
-1.5
+0.1
pH
R2A_PIPES pH 4.5
+0.1
-3.2
-3.6
-0.9
-0.1
pH
R2A_PIPES pH 4.25
-0.0
-3.0
-3.2
-1.2
-0.2
no stress control
no stress control
-0.0
-3.3
-2.2
-1.9
+0.3
no stress control
no stress control
+0.1
-3.1
-2.3
-1.8
-0.1
no stress control
no stress control
-0.0
-3.3
-2.3
-1.2
-0.2
no stress control
no stress control
+0.1
-3.3
-2.4
-1.2
-0.0
no stress control
no stress control
-0.0
-3.3
-2.2
-1.3
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
-3.0
-1.2
-1.9
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
-3.0
-1.2
-1.4
-0.1
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