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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00345 and LRK55_RS00350 are separated by 266 nucleotides
LRK55_RS00350 and LRK55_RS00355 are separated by 128 nucleotides
LRK55_RS00355 and LRK55_RS00360 overlap by 1 nucleotides
LRK55_RS00360 and LRK55_RS00365 are separated by 145 nucleotides
LRK55_RS00345: LRK55_RS00345 - restriction endonuclease, at 67,559 to 68,443
_RS00345
LRK55_RS00350: LRK55_RS00350 - HD domain-containing protein, at 68,710 to 69,342
_RS00350
LRK55_RS00355: LRK55_RS00355 - alanine racemase, at 69,471 to 70,544
_RS00355
LRK55_RS00360: LRK55_RS00360 - D-amino acid dehydrogenase, at 70,544 to 71,824
_RS00360
LRK55_RS00365: LRK55_RS00365 - winged helix-turn-helix transcriptional regulator, at 71,970 to 72,467
_RS00365
Group
Condition
LRK55
_RS00345
LRK55
_RS00350
LRK55
_RS00355
LRK55
_RS00360
LRK55
_RS00365
pH
R2A_PIPES pH 4.5
-0.3
-0.3
N.D.
-0.7
-0.5
stress
R2A with Zinc chloride 2560 uM
-0.5
-0.4
N.D.
-0.4
-0.4
stress
R2A with Zinc chloride 2560 uM
-0.4
-0.3
N.D.
-0.3
-0.6
pH
R2A_PIPES pH 4.5
-0.1
-0.1
N.D.
-0.5
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.0
N.D.
-0.3
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-0.2
N.D.
-0.2
-0.3
pH
R2A_PIPES pH 4.25
-0.3
-0.2
N.D.
-0.1
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-0.2
N.D.
-0.2
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
-0.2
N.D.
-0.4
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.1
N.D.
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-0.1
N.D.
-0.3
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.0
N.D.
-0.2
-0.2
no stress control
no stress control
+0.4
-0.1
N.D.
-0.4
-0.2
no stress control
no stress control
+0.3
-0.1
N.D.
-0.3
-0.2
no stress control
no stress control
+0.1
+0.0
N.D.
-0.2
-0.3
no stress control
no stress control
+0.3
+0.0
N.D.
-0.3
-0.3
no stress control
no stress control
+0.4
+0.0
N.D.
-0.3
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.2
N.D.
-0.3
-0.1
no stress control
no stress control
+0.3
+0.0
N.D.
-0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.0
N.D.
-0.1
-0.1
no stress control
no stress control
+0.4
+0.2
N.D.
-0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
+0.1
N.D.
-0.1
-0.1
pH
R2A_PIPES pH 4.25
+0.0
+0.5
N.D.
+0.0
+0.1
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