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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00240 and LRK55_RS00245 are separated by 128 nucleotides
LRK55_RS00245 and LRK55_RS00250 are separated by 101 nucleotides
LRK55_RS00250 and LRK55_RS00255 are separated by 32 nucleotides
LRK55_RS00255 and LRK55_RS00260 are separated by 347 nucleotides
LRK55_RS00240: LRK55_RS00240 - tRNA-Leu, at 43,754 to 43,840
_RS00240
LRK55_RS00245: LRK55_RS00245 - LysR family transcriptional regulator, at 43,969 to 44,835
_RS00245
LRK55_RS00250: LRK55_RS00250 - nuclear transport factor 2 family protein, at 44,937 to 45,725
_RS00250
LRK55_RS00255: LRK55_RS00255 - VOC family protein, at 45,758 to 46,174
_RS00255
LRK55_RS00260: LRK55_RS00260 - aminomethyl-transferring glycine dehydrogenase, at 46,522 to 49,389
_RS00260
Group
Condition
LRK55
_RS00240
LRK55
_RS00245
LRK55
_RS00250
LRK55
_RS00255
LRK55
_RS00260
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.5
-0.4
+0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.4
-0.4
-0.4
+0.3
pH
R2A_PIPES pH 4.5
N.D.
-0.2
-0.7
-0.1
+0.3
pH
R2A_PIPES pH 4.5
N.D.
-0.4
-0.6
+0.0
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.3
-0.4
+0.2
-0.1
no stress control
no stress control
N.D.
-0.4
-0.2
+0.0
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.4
-0.6
-0.6
+1.2
no stress control
no stress control
N.D.
-0.2
-0.2
-0.2
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.2
-0.6
-0.1
+0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
-0.4
-0.3
+0.5
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.4
-0.6
-0.2
+0.8
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.3
-0.5
-0.1
+0.5
no stress control
no stress control
N.D.
-0.3
-0.2
-0.1
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.2
-0.3
-0.2
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.2
-0.2
-0.2
+0.4
no stress control
no stress control
N.D.
-0.2
-0.2
+0.0
+0.2
no stress control
no stress control
N.D.
-0.2
-0.4
+0.2
+0.2
no stress control
no stress control
N.D.
-0.1
-0.3
+0.0
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
-0.4
+0.0
+0.5
no stress control
no stress control
N.D.
-0.0
-0.3
+0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-0.1
-0.1
+0.0
+0.4
pH
R2A_PIPES pH 4.25
N.D.
-0.3
-0.8
+0.5
+1.1
pH
R2A_PIPES pH 4.25
N.D.
-0.4
-0.4
+0.3
+1.0
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