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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS00105 and LRK55_RS00110 are separated by 129 nucleotides
LRK55_RS00110 and LRK55_RS00115 are separated by 66 nucleotides
LRK55_RS00115 and LRK55_RS00120 are separated by 72 nucleotides
LRK55_RS00120 and LRK55_RS00125 are separated by 39 nucleotides
LRK55_RS00105: LRK55_RS00105 - tRNA-Gly, at 18,482 to 18,557
_RS00105
LRK55_RS00110: LRK55_RS00110 - tRNA-Gly, at 18,687 to 18,762
_RS00110
LRK55_RS00115: LRK55_RS00115 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 18,829 to 19,431
_RS00115
LRK55_RS00120: LRK55_RS00120 - excinuclease ABC subunit UvrC, at 19,504 to 21,330
_RS00120
LRK55_RS00125: LRK55_RS00125 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 21,370 to 22,149
_RS00125
Group
Condition
LRK55
_RS00105
LRK55
_RS00110
LRK55
_RS00115
LRK55
_RS00120
LRK55
_RS00125
pH
R2A_PIPES pH 4.25
-3.4
N.D.
N.D.
-3.7
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-2.7
N.D.
N.D.
-3.0
N.D.
pH
R2A_PIPES pH 4.25
-1.9
N.D.
N.D.
-3.6
N.D.
no stress control
no stress control
-2.2
N.D.
N.D.
-3.3
N.D.
no stress control
no stress control
-2.1
N.D.
N.D.
-3.2
N.D.
stress
R2A with Zinc chloride 2560 uM
-1.2
N.D.
N.D.
-4.0
N.D.
pH
R2A_PIPES pH 4.5
-1.1
N.D.
N.D.
-3.7
N.D.
pH
R2A_PIPES pH 4.5
-1.0
N.D.
N.D.
-3.7
N.D.
no stress control
no stress control
-1.3
N.D.
N.D.
-3.3
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.6
N.D.
N.D.
-3.9
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
N.D.
N.D.
-3.7
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
N.D.
N.D.
-3.7
N.D.
no stress control
no stress control
-1.6
N.D.
N.D.
-2.7
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
N.D.
N.D.
-3.7
N.D.
no stress control
no stress control
-1.2
N.D.
N.D.
-3.0
N.D.
no stress control
no stress control
-1.2
N.D.
N.D.
-2.9
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.0
N.D.
N.D.
-2.9
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.3
N.D.
N.D.
-3.6
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
N.D.
N.D.
-3.3
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
N.D.
N.D.
-3.2
N.D.
no stress control
no stress control
+0.4
N.D.
N.D.
-3.9
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
N.D.
N.D.
-3.5
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
N.D.
N.D.
-2.7
N.D.
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