Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS18085 and LRK54_RS18090 are separated by 196 nucleotidesLRK54_RS18090 and LRK54_RS18095 are separated by 9 nucleotidesLRK54_RS18095 and LRK54_RS18100 overlap by 23 nucleotidesLRK54_RS18100 and LRK54_RS18105 are separated by 0 nucleotides LRK54_RS18085: LRK54_RS18085 - MBL fold metallo-hydrolase, at 3,947,892 to 3,948,815 _RS18085 LRK54_RS18090: LRK54_RS18090 - hypothetical protein, at 3,949,012 to 3,949,353 _RS18090 LRK54_RS18095: LRK54_RS18095 - DUF2231 domain-containing protein, at 3,949,363 to 3,949,791 _RS18095 LRK54_RS18100: LRK54_RS18100 - DNA-3-methyladenine glycosylase, at 3,949,769 to 3,950,416 _RS18100 LRK54_RS18105: LRK54_RS18105 - DNA oxidative demethylase AlkB, at 3,950,417 to 3,951,073 _RS18105
Group Condition LRK54_RS18085 LRK54_RS18090 LRK54_RS18095 LRK54_RS18100 LRK54_RS18105
phage 1C-T1 -0.4 N.D. -0.3 -0.4 -1.1
phage 1A-T1 -0.4 N.D. -0.4 +0.2 -1.4
phage phage 31.1 -0.2 N.D. -0.4 -0.3 -0.8
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.1 N.D. -0.0 -0.3 -1.3
stress R2A_PIPES with Cobalt chloride 256 uM -0.1 N.D. -0.2 +0.2 -1.1
phage 3B-T1 -0.1 N.D. -0.3 -0.2 -0.5
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.0 N.D. -0.0 +0.4 -0.8
phage 2B-T2 -0.2 N.D. -0.3 -0.5 +0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 N.D. -0.3 +0.2 -0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.5 N.D. -0.3 -0.1 -0.4
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 N.D. +0.3 +0.2 -0.7
phage 1D-T2 -0.2 N.D. -0.4 -0.1 +0.7
phage SA-T2 +0.1 N.D. -0.3 -0.3 +0.5
stress R2A with Selective_ion_mix_1 1 X +0.2 N.D. +0.4 -0.5 +0.2
phage 2F-T1 -0.2 N.D. -0.3 +0.1 +0.6
phage 2F-T2 -0.2 N.D. -0.2 -0.2 +1.0
stress R2A with Other_metal_mix 1 X -0.1 N.D. -0.1 -0.1 +0.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.0 N.D. -0.3 +0.2 +0.7
r2a_control R2A control +0.1 N.D. -0.3 +0.0 +0.8
stress R2A with Cobalt chloride 0.15625 mM -0.2 N.D. +0.1 +0.3 +0.6
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.0 N.D. +0.2 -0.2 +0.8
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.2 N.D. -0.2 +0.4 +0.4
stress R2A with chromate 0.0048828125 mM -0.3 N.D. -0.2 +0.5 +0.9
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.2 N.D. +0.1 +0.2 +0.8
phage 3E-T2 +0.2 N.D. -0.2 +0.0 +1.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.4 N.D. +0.1 +0.4 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM +0.3 N.D. -0.1 -0.2 +1.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.4 N.D. +0.1 +0.0 +1.6
stress R2A with Calcium chloride 250 mM -0.1 N.D. +0.2 +0.2 +1.1
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.2 N.D. +0.1 -0.1 +1.6
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