Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17960 and LRK54_RS17965 are separated by 123 nucleotidesLRK54_RS17965 and LRK54_RS17970 are separated by 82 nucleotidesLRK54_RS17970 and LRK54_RS17975 are separated by 154 nucleotidesLRK54_RS17975 and LRK54_RS17980 are separated by 133 nucleotides LRK54_RS17960: LRK54_RS17960 - DNA repair protein RecN, at 3,919,538 to 3,921,211 _RS17960 LRK54_RS17965: LRK54_RS17965 - heat-inducible transcriptional repressor HrcA, at 3,921,335 to 3,922,405 _RS17965 LRK54_RS17970: LRK54_RS17970 - nucleotide exchange factor GrpE, at 3,922,488 to 3,923,021 _RS17970 LRK54_RS17975: LRK54_RS17975 - molecular chaperone DnaK, at 3,923,176 to 3,925,095 _RS17975 LRK54_RS17980: LRK54_RS17980 - molecular chaperone DnaJ, at 3,925,229 to 3,926,359 _RS17980
Group Condition LRK54_RS17960 LRK54_RS17965 LRK54_RS17970 LRK54_RS17975 LRK54_RS17980
stress R2A with Strontium chloride 3.90625 mM -0.6 -0.9 N.D. N.D. -1.1
stress R2A with Gallium(III)chloride 0.78125 mM -0.3 -0.4 N.D. N.D. -1.8
stress R2A with Aluminum chloride 1.5625 mM -0.1 -0.4 N.D. N.D. -1.7
stress R2A with Uranyl acetate 2.5 mM -0.8 -0.2 N.D. N.D. -1.1
stress R2A with Aluminum chloride 3.125 mM -0.4 -0.6 N.D. N.D. -1.0
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.9 -0.4 N.D. N.D. -0.6
pH R2A_PIPES pH 4 -0.6 -0.4 N.D. N.D. -0.8
stress R2A with Calcium chloride 250 mM -0.3 +0.1 N.D. N.D. -1.5
stress R2A with Aluminum chloride 1.5625 mM -0.1 -0.2 N.D. N.D. -1.3
carbon source a-Cyclodextrin 20 mM -0.7 -1.0 N.D. N.D. +0.1
pH R2A_PIPES pH 4 -0.4 -0.3 N.D. N.D. -0.8
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -0.3 -0.7 N.D. N.D. -0.5
carbon source a-Cyclodextrin 20 mM -0.6 -0.8 N.D. N.D. +0.2
r2a_control R2A control -0.8 +0.2 N.D. N.D. -0.6
stress R2A with bismuth(III) chloride 0.03125 mM -1.0 +0.3 N.D. N.D. -0.4
stress R2A with Zinc chloride 0.625 mM -0.6 +0.3 N.D. N.D. -0.8
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -1.0 -0.4 N.D. N.D. +0.3
stress R2A with Calcium chloride 125 mM -0.3 +0.3 N.D. N.D. -1.0
stress R2A with Calcium chloride 125 mM -0.2 +0.3 N.D. N.D. -1.1
stress R2A with selenate 31.25 mM -1.2 +0.8 N.D. N.D. -0.6
r2a_control R2A control -0.5 +0.3 N.D. N.D. -0.7
carbon source Gly-Glu 20 mM -0.3 -1.2 N.D. N.D. +0.7
carbon source Gly-Glu 20 mM -0.1 -1.1 N.D. N.D. +0.8
stress R2A with selenate 31.25 mM -0.8 +0.7 N.D. N.D. -0.3
stress R2A with silver chloride 1 mM -0.8 +0.7 N.D. N.D. -0.2
stress R2A with silver chloride 1 mM -0.6 +0.8 N.D. N.D. -0.1
stress R2A with lithium chloride 15.625 mM -0.7 +0.8 N.D. N.D. +0.2
stress R2A with Magnesium sulfate 3.90625 mM -0.7 +0.4 N.D. N.D. +0.6
stress R2A with Nickel (II) chloride 0.3125 mM -0.8 +0.5 N.D. N.D. +1.3
phage phage 31.1 -0.3 -0.1 N.D. N.D. +2.8
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