Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 314 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
LRK54_RS17730 and LRK54_RS17735 overlap by 11 nucleotides
LRK54_RS17735 and LRK54_RS17740 are separated by 9 nucleotides
LRK54_RS17740 and LRK54_RS17745 are separated by 30 nucleotides
LRK54_RS17745 and LRK54_RS17750 are separated by 333 nucleotides
LRK54_RS17730: LRK54_RS17730 - 4Fe-4S binding protein, at 3,879,012 to 3,879,719
_RS17730
LRK54_RS17735: LRK54_RS17735 - hypothetical protein, at 3,879,709 to 3,881,679
_RS17735
LRK54_RS17740: LRK54_RS17740 - dynamin family protein, at 3,881,689 to 3,883,620
_RS17740
LRK54_RS17745: LRK54_RS17745 - DUF190 domain-containing protein, at 3,883,651 to 3,883,974
_RS17745
LRK54_RS17750: LRK54_RS17750 - DUF190 domain-containing protein, at 3,884,308 to 3,884,580
_RS17750
Group
Condition
LRK54
_RS17730
LRK54
_RS17735
LRK54
_RS17740
LRK54
_RS17745
LRK54
_RS17750
biofilm assay; biofilm sample
biofilm; Day2; NLDM;
-0.7
-0.3
-0.2
+0.1
-0.3
stress
R2A with arsenate 31.25 mM
-0.1
+0.1
-0.1
-0.4
-0.9
stress
R2A with Selective_ion_mix_1 1 X
-0.1
-0.5
-0.2
+0.1
-0.5
phage
1D-T2
-0.4
-0.0
+0.1
-0.3
-0.5
stress
R2A with Selective_ion_mix_1 1 X
-0.2
-0.1
+0.1
-0.1
-0.8
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
-0.7
+0.0
-0.1
+0.1
-0.5
stress
R2A with Zinc chloride 0.3125 mM
+0.1
-0.0
-0.0
-0.1
-0.9
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
-0.1
+0.2
-0.1
-0.4
-0.4
stress
R2A with lithium chloride 15.625 mM
+0.2
-0.0
-0.2
-0.2
-0.5
phage
4B-T2
-0.6
+0.1
+0.3
-0.1
-0.4
stress
R2A with Cobalt chloride 0.15625 mM
-0.2
-0.1
-0.0
+0.3
-0.5
r2a_control
R2A control
+0.3
-0.1
-0.1
-0.3
-0.5
phage
4E-T2
-0.9
-0.0
+0.3
-0.1
+0.2
phage
1C-T2
-0.2
+0.1
-0.1
-0.5
+0.2
stress
R2A with Zinc chloride 0.625 mM
-0.6
-0.1
-0.3
+0.1
+0.4
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
-0.3
+0.1
-0.1
+0.3
-0.4
pH
R2A pH6
+0.4
+0.0
-0.2
-0.1
-0.5
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.5
-0.2
+0.2
+0.2
+0.1
carbon source
a-Cyclodextrin 20 mM
-0.2
+0.6
-0.0
-0.1
-0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
+0.2
+0.0
-0.4
-0.5
+0.6
biofilm assay; planktonic sample
Planktonic; Day2; SGW; pH7
-0.3
-0.3
+0.2
+0.0
+0.3
stress
R2A with Selective_ion_mix_1 1 X
+0.4
-0.2
+0.2
+0.0
-0.3
no phage control
No phage control
-0.7
+0.1
+0.2
+0.3
+0.2
pH
R2A pH7
+0.4
+0.3
-0.1
-0.0
-0.3
biofilm assay; biofilm sample
biofilm; Day1; NLDM;
+0.3
+0.1
+0.2
+0.3
-0.3
phage
2F-T2
-0.3
+0.0
+0.3
-0.2
+0.7
phage
4E-T1
+0.2
-0.0
+0.2
-0.3
+0.6
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
+0.4
-0.1
-0.1
+0.1
+0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.8
-0.5
+0.4
+0.0
+0.3
pH
R2A_PIPES pH 4.25
+0.6
-0.1
+0.2
-0.1
+0.3
remove
LRK54_RS17730
plot
remove
LRK54_RS17735
plot
remove
LRK54_RS17740
remove
LRK54_RS17745
plot
remove
LRK54_RS17750
plot