Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17600 and LRK54_RS17605 are separated by 91 nucleotidesLRK54_RS17605 and LRK54_RS17610 are separated by 9 nucleotidesLRK54_RS17610 and LRK54_RS17615 overlap by 4 nucleotidesLRK54_RS17615 and LRK54_RS17620 are separated by 580 nucleotides LRK54_RS17600: LRK54_RS17600 - hypothetical protein, at 3,848,602 to 3,849,063 _RS17600 LRK54_RS17605: LRK54_RS17605 - cytochrome c, at 3,849,155 to 3,849,775 _RS17605 LRK54_RS17610: LRK54_RS17610 - copper resistance protein B, at 3,849,785 to 3,851,044 _RS17610 LRK54_RS17615: LRK54_RS17615 - copper resistance system multicopper oxidase, at 3,851,041 to 3,852,810 _RS17615 LRK54_RS17620: LRK54_RS17620 - hypothetical protein, at 3,853,391 to 3,853,720 _RS17620
Group Condition LRK54_RS17600 LRK54_RS17605 LRK54_RS17610 LRK54_RS17615 LRK54_RS17620
stress R2A with bismuth(III) chloride 0.03125 mM -0.1 +0.1 -0.3 -0.3 -3.2
stress R2A with copper (II) chloride 0.3125 mM +0.2 -0.3 -1.3 -1.5 -0.6
stress R2A with copper (II) chloride 0.3125 mM -0.3 -0.3 -1.2 -1.6 +0.3
stress R2A with silver chloride 1 mM -0.2 -0.9 -0.2 -0.6 -1.1
stress R2A with Chloride 250 mM -0.3 +0.1 -0.3 +0.0 -2.2
phage phage 31.1 -0.1 -0.3 -0.1 -0.0 -2.0
stress R2A with chromate 0.0048828125 mM -1.1 -0.5 -0.3 -0.1 +0.2
stress R2A with silver chloride 1 mM -0.7 -0.5 -0.1 -0.5 +0.2
r2a_control R2A control -0.3 -0.3 -0.0 +0.0 -1.1
phage 1D-T2 -0.5 -0.1 -0.3 +0.0 -0.7
stress R2A with nitrate 250 mM -0.5 +0.1 -0.3 -0.0 -0.8
stress R2A with Selective_ion_mix_1 1 X -0.3 +0.1 -0.5 +0.2 -0.7
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -1.7 +0.6 +0.0 +0.1 -0.3
stress R2A with lithium chloride 15.625 mM -0.4 -0.2 +0.2 +0.0 -0.9
stress R2A with Nickel (II) chloride 0.3125 mM -1.1 -0.4 +0.0 +0.1 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.9 +0.5 +0.2 -0.1 -0.7
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -1.2 -0.2 -0.2 -0.0 +0.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 +0.2 -0.2 -0.1 -1.0
phage 1E-T1 -0.3 +0.5 -0.3 -0.3 -0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.9 -0.4 -0.1 +0.1 +0.8
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.8 -0.5 +0.0 -0.0 +0.9
no phage control No phage control +0.1 +0.3 +0.3 -0.0 -1.1
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.7 -0.5 -0.2 +0.2 -0.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.2 +0.5 +0.3 +0.0 -0.9
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.7 +0.3 +0.2 +0.1 -0.8
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.6 +0.6 +0.1 +0.1 +0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.7 -0.4 +0.4 -0.1 +0.3
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.4 +0.2 +0.3 +0.0 +0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.5 +0.3 +0.3 +0.1 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.5 +0.9 +0.1 +0.2 +0.0
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