Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17575 and LRK54_RS17580 are separated by 131 nucleotidesLRK54_RS17580 and LRK54_RS17585 are separated by 71 nucleotidesLRK54_RS17585 and LRK54_RS17590 overlap by 4 nucleotidesLRK54_RS17590 and LRK54_RS17595 overlap by 4 nucleotides LRK54_RS17575: LRK54_RS17575 - hypothetical protein, at 3,841,970 to 3,842,311 _RS17575 LRK54_RS17580: LRK54_RS17580 - copper-binding protein, at 3,842,443 to 3,842,718 _RS17580 LRK54_RS17585: LRK54_RS17585 - CusA/CzcA family heavy metal efflux RND transporter, at 3,842,790 to 3,845,969 _RS17585 LRK54_RS17590: LRK54_RS17590 - efflux RND transporter periplasmic adaptor subunit, at 3,845,966 to 3,847,237 _RS17590 LRK54_RS17595: LRK54_RS17595 - TolC family protein, at 3,847,234 to 3,848,526 _RS17595
Group Condition LRK54_RS17575 LRK54_RS17580 LRK54_RS17585 LRK54_RS17590 LRK54_RS17595
stress R2A with silver chloride 1 mM -0.3 -0.7 +0.1 -0.9 -1.8
stress R2A with silver chloride 1 mM -0.4 -0.4 -0.1 -0.4 -0.9
stress R2A with Selective_ion_mix_1 1 X +0.1 -0.6 -0.2 -0.2 -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 -0.7 +0.1 -0.1 -1.2
phage 1C-T2 +0.3 -0.7 -0.2 -0.5 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.0 +0.1 -0.1 -0.4 -1.1
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.2 -0.1 -0.2 -0.0 -1.0
stress R2A with chromate 0.0048828125 mM -0.2 -1.2 -0.2 -0.1 +0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.6 -0.4 +0.1 -0.2 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 +0.2 -0.2 -0.3 -0.9
biofilm assay; planktonic sample planktonic; Day1; NLDM; +0.2 -0.2 +0.1 -0.6 -0.6
phage 4B-T1 +0.0 +0.2 +0.1 -0.1 -1.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.1 +0.3 -0.1 -1.0 -0.2
stress R2A with m-arsenite 0.078125 mM -0.1 +0.4 -0.0 -0.5 -0.4
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 +0.4 -0.1 -0.0 -0.9
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.1 -0.4 +0.1 +0.5 -0.6
phage 1A-T2 +0.4 +0.1 +0.3 -0.1 -1.0
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.1 +0.5 -0.1 +0.2 -0.7
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.3 +0.4 -0.2 -0.1 -0.6
phage 4B-T2 -0.2 -0.4 +0.2 +0.1 +0.5
stress R2A with Selective_ion_mix_1 1 X +0.3 +0.4 -0.1 -0.3 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM -0.6 -0.1 +0.2 +0.8 +0.2
phage 2F-T2 -0.0 +0.6 +0.1 -0.3 +0.3
pH R2A pH5 +0.1 +0.5 -0.0 -0.3 +0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.5 +0.5 -0.2 -0.2 +0.1
phage SA-T2 +0.2 +0.7 +0.3 -0.1 +0.1
stress R2A_PIPES with Cadmium chloride 16 uM +0.4 +0.6 +0.2 +0.0 -0.1
stress R2A_PIPES with Cadmium chloride 16 uM +0.5 +0.7 +0.3 +0.1 +0.2
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.7 +0.5 +0.5 +0.2 +0.3
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.7 +0.9 +0.3 +0.3 +0.5
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