Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17545 and LRK54_RS17550 are separated by 70 nucleotidesLRK54_RS17550 and LRK54_RS17555 overlap by 4 nucleotidesLRK54_RS17555 and LRK54_RS17560 overlap by 1 nucleotidesLRK54_RS17560 and LRK54_RS17565 overlap by 4 nucleotides LRK54_RS17545: LRK54_RS17545 - cation diffusion facilitator family transporter, at 3,834,503 to 3,835,483 _RS17545 LRK54_RS17550: LRK54_RS17550 - P-II family nitrogen regulator, at 3,835,554 to 3,835,880 _RS17550 LRK54_RS17555: LRK54_RS17555 - CusA/CzcA family heavy metal efflux RND transporter, at 3,835,877 to 3,839,011 _RS17555 LRK54_RS17560: LRK54_RS17560 - efflux RND transporter periplasmic adaptor subunit, at 3,839,011 to 3,840,108 _RS17560 LRK54_RS17565: LRK54_RS17565 - TolC family protein, at 3,840,105 to 3,841,268 _RS17565
Group Condition LRK54_RS17545 LRK54_RS17550 LRK54_RS17555 LRK54_RS17560 LRK54_RS17565
stress R2A with Zinc chloride 0.625 mM -5.4 -1.6 -4.9 -5.0 -4.5
stress R2A with Zinc chloride 0.625 mM -4.9 -0.6 -4.4 -4.4 -4.9
stress R2A with Zinc chloride 0.3125 mM -2.0 -0.6 -5.1 -4.5 -5.1
stress R2A with Zinc chloride 0.3125 mM -1.8 -0.8 -4.7 -5.0 -4.5
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +1.3 -2.4 -5.1 -4.8 -5.2
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +1.1 -2.7 -4.5 -4.4 -4.8
stress R2A_PIPES with Zinc chloride 640 uM -1.5 -0.0 -4.0 -4.9 -4.1
stress R2A_PIPES with Cadmium chloride 16 uM +0.5 -1.3 -4.0 -5.0 -4.2
stress R2A_PIPES with Cadmium chloride 16 uM +0.9 -0.8 -4.4 -4.9 -4.2
stress R2A with Cadmium chloride hemipentahydrate 0.01953125 mM -0.0 -0.0 -1.7 -2.8 -1.5
stress R2A with Cadmium chloride hemipentahydrate 0.01953125 mM +0.2 +0.1 -1.6 -1.1 -1.6
stress R2A with SpecU metal mix 1 X -0.0 +0.1 -1.5 -1.2 -1.4
stress R2A with SpecU metal mix 1 X +0.0 -0.1 -1.3 -1.3 -1.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.0 -2.9 +0.2 -0.8 -0.3
stress R2A with FW104 filtrate 0.5 X -0.1 -0.2 -1.1 -1.2 -0.8
stress R2A with FW104 filtrate 0.5 X -0.1 -0.0 -0.9 -1.3 -0.8
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.1 +0.1 -0.8 -1.4 -0.8
stress R2A with FW104 filtrate 0.5 X -0.3 +0.0 -1.1 -0.8 -0.8
stress R2A with FW104 filtrate 0.5 X +0.1 +0.1 -0.9 -1.3 -0.9
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.3 -2.1 +0.5 -0.5 -0.2
stress R2A with Cobalt chloride 0.078125 mM -0.5 +0.5 +0.8 +0.7 +0.7
stress R2A with Cobalt chloride 0.078125 mM -0.3 +0.5 +0.8 +0.5 +0.8
r2a_control R2A control -0.3 +0.6 +0.7 +0.9 +0.6
stress R2A with Cesium chloride 3.90625 mM -0.1 +0.3 +0.8 +1.4 +0.8
stress R2A with Cobalt chloride 0.15625 mM -0.2 +2.1 +0.9 -0.6 +1.2
stress R2A_PIPES with Cobalt chloride 256 uM -0.3 +1.6 +0.9 +0.4 +1.0
stress R2A with Cesium chloride 3.90625 mM -0.2 +0.5 +0.8 +1.7 +0.8
stress R2A with Cobalt chloride 0.15625 mM -0.3 +1.9 +1.0 +0.1 +1.1
stress R2A_PIPES with Cobalt chloride 256 uM -0.1 +1.9 +1.2 +0.4 +1.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.0 -0.0 +2.2 +2.8 +3.1
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