Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17405 and LRK54_RS17410 are separated by 163 nucleotidesLRK54_RS17410 and LRK54_RS17415 are separated by 25 nucleotidesLRK54_RS17415 and LRK54_RS17420 overlap by 4 nucleotidesLRK54_RS17420 and LRK54_RS17425 are separated by 77 nucleotides LRK54_RS17405: LRK54_RS17405 - divalent metal cation transporter, at 3,801,922 to 3,803,208 _RS17405 LRK54_RS17410: LRK54_RS17410 - phosphoketolase family protein, at 3,803,372 to 3,805,774 _RS17410 LRK54_RS17415: LRK54_RS17415 - acetate/propionate family kinase, at 3,805,800 to 3,806,990 _RS17415 LRK54_RS17420: LRK54_RS17420 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase, at 3,806,987 to 3,808,402 _RS17420 LRK54_RS17425: LRK54_RS17425 - cation:proton antiporter, at 3,808,480 to 3,809,685 _RS17425
Group Condition LRK54_RS17405 LRK54_RS17410 LRK54_RS17415 LRK54_RS17420 LRK54_RS17425
stress R2A with Zinc chloride 0.625 mM -0.3 -0.2 -0.1 -0.3 N.D.
stress R2A with Cobalt chloride 0.15625 mM -0.1 -0.1 -0.1 -0.3 N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.0 +0.1 -0.1 -0.5 N.D.
stress R2A with Cobalt chloride 0.15625 mM -0.1 +0.0 +0.0 -0.5 N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.2 -0.2 -0.1 +0.3 N.D.
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.4 -0.0 +0.0 +0.3 N.D.
stress R2A with Calcium chloride 250 mM -0.3 +0.0 -0.1 +0.2 N.D.
carbon source a-Cyclodextrin 20 mM -0.1 -0.1 +0.4 -0.2 N.D.
phage 2E-T2 +0.2 +0.1 -0.0 -0.3 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 -0.1 -0.1 +0.4 N.D.
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.2 +0.2 +0.3 -0.6 N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 +0.3 +0.1 -0.3 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.2 +0.1 -0.1 +0.3 N.D.
phage 3E-T1 -0.2 +0.1 -0.2 +0.4 N.D.
stress R2A with Gallium(III)chloride 0.78125 mM -0.1 -0.1 +0.2 +0.2 N.D.
phage 1C-T2 -0.0 -0.1 -0.1 +0.4 N.D.
phage 3B-T1 -0.2 +0.2 +0.1 +0.2 N.D.
phage SA-T2 +0.1 -0.1 -0.1 +0.5 N.D.
phage 1A-T1 -0.1 +0.2 -0.0 +0.4 N.D.
stress R2A with bismuth(III) chloride 0.03125 mM -0.1 +0.1 +0.2 +0.3 N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 +0.2 +0.1 +0.2 N.D.
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.2 -0.1 -0.0 +0.5 N.D.
phage S3-T1 -0.0 +0.2 +0.1 +0.5 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.5 +0.2 -0.3 +0.3 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.2 +0.1 +0.2 +0.3 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 +0.1 +0.1 +0.4 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.1 +0.2 +0.2 +0.5 N.D.
phage 4B-T2 +0.6 +0.0 +0.2 +0.5 N.D.
stress R2A with lithium chloride 15.625 mM +0.5 +0.9 +1.2 +1.2 N.D.
stress R2A with lithium chloride 15.625 mM +0.8 +1.2 +1.5 +1.6 N.D.
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