Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17305 and LRK54_RS17310 are separated by 118 nucleotidesLRK54_RS17310 and LRK54_RS17315 are separated by 263 nucleotidesLRK54_RS17315 and LRK54_RS17320 are separated by 190 nucleotidesLRK54_RS17320 and LRK54_RS17325 are separated by 77 nucleotides LRK54_RS17305: LRK54_RS17305 - hydrogenase 4 subunit B, at 3,781,154 to 3,783,175 _RS17305 LRK54_RS17310: LRK54_RS17310 - hypothetical protein, at 3,783,294 to 3,783,515 _RS17310 LRK54_RS17315: LRK54_RS17315 - ligand-binding sensor domain-containing diguanylate cyclase, at 3,783,779 to 3,786,817 _RS17315 LRK54_RS17320: LRK54_RS17320 - replication-associated recombination protein A, at 3,787,008 to 3,788,345 _RS17320 LRK54_RS17325: LRK54_RS17325 - hypothetical protein, at 3,788,423 to 3,789,001 _RS17325
Group Condition LRK54_RS17305 LRK54_RS17310 LRK54_RS17315 LRK54_RS17320 LRK54_RS17325
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -2.1 -0.2 +0.0 -0.3 -0.2
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -1.7 -0.4 +0.1 -0.2 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors -1.6 -0.4 +0.1 -0.2 +0.4
stress R2A with bismuth(III) chloride 0.03125 mM -0.2 -1.1 -0.1 +0.0 -0.1
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -1.4 +0.0 +0.0 -0.0 -0.2
phage 2E-T1 -0.3 -0.1 -0.1 -0.2 -0.6
phage 4E-T1 -0.2 -0.4 +0.0 -0.2 -0.2
carbon source D-Glucose (C) and 20 AA mix; 30C -0.0 -0.2 -0.1 -0.3 -0.3
stress R2A with Magnesium sulfate 3.90625 mM +0.1 -0.7 +0.1 -0.1 +0.1
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.2 -0.3 -0.2 +0.1 -0.4
stress R2A with Calcium chloride 250 mM +0.1 -0.6 +0.1 +0.1 -0.1
phage 3E-T2 -0.2 -0.2 -0.1 -0.2 +0.2
r2a_control R2A control -0.2 -0.5 +0.1 +0.1 +0.1
stress R2A with nitrite 50 mM +0.1 -0.3 +0.2 -0.2 -0.2
stress R2A with Cesium chloride 3.90625 mM +0.1 -0.6 +0.1 +0.1 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.0 -0.5 +0.2 +0.0 +0.2
stress R2A with Magnesium sulfate 3.90625 mM +0.1 -0.5 +0.1 +0.1 +0.1
stress R2A with Barium chloride 1.25 mM +0.1 -0.5 +0.1 -0.0 +0.3
stress R2A with m-arsenite 0.078125 mM +0.1 -0.5 +0.2 +0.1 +0.1
r2a_control R2A control -0.0 -0.5 +0.1 +0.1 +0.3
stress R2A with m-arsenite 0.078125 mM +0.2 -0.4 +0.3 -0.1 +0.0
stress R2A with Cobalt chloride 0.15625 mM -0.1 -0.2 -0.2 +0.5 +0.1
stress R2A with nitrite 25 mM +0.2 -0.4 +0.1 -0.1 +0.3
stress R2A with copper (II) chloride 0.3125 mM +0.1 -0.3 +0.2 +0.2 -0.2
stress R2A with Nickel (II) chloride 0.3125 mM +0.2 -0.6 +0.2 +0.2 +0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 -0.4 +0.1 +0.4 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.4 +0.4 +0.1 +0.4 -0.0
phage 4B-T1 -0.1 +0.4 +0.1 -0.1 +0.3
stress R2A with lithium chloride 15.625 mM +0.2 +0.0 +0.3 +0.1 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 -0.0 +0.1 +0.4 +0.2
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