Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS17175 and LRK54_RS17180 are separated by 106 nucleotidesLRK54_RS17180 and LRK54_RS17185 are separated by 138 nucleotidesLRK54_RS17185 and LRK54_RS17190 are separated by 96 nucleotidesLRK54_RS17190 and LRK54_RS17195 are separated by 54 nucleotides LRK54_RS17175: LRK54_RS17175 - YdcF family protein, at 3,752,517 to 3,753,278 _RS17175 LRK54_RS17180: LRK54_RS17180 - aldehyde dehydrogenase family protein, at 3,753,385 to 3,754,815 _RS17180 LRK54_RS17185: LRK54_RS17185 - exodeoxyribonuclease VII large subunit, at 3,754,954 to 3,756,324 _RS17185 LRK54_RS17190: LRK54_RS17190 - phospholipase D-like domain-containing protein, at 3,756,421 to 3,757,887 _RS17190 LRK54_RS17195: LRK54_RS17195 - acetyl-CoA hydrolase, at 3,757,942 to 3,759,897 _RS17195
Group Condition LRK54_RS17175 LRK54_RS17180 LRK54_RS17185 LRK54_RS17190 LRK54_RS17195
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.7 -0.8 -1.1 -1.1 -0.8
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.6 -0.4 -0.8 -1.1 -0.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.5 -0.5 -0.7 -0.8 -0.6
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.2 -1.0 -0.6 -0.4 -0.4
carbon source D-Trehalose 20 mM -0.4 -0.5 -0.6 -0.4 -0.4
r2a_control R2A control -0.3 -0.3 -0.6 -0.5 -0.3
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.5 -0.3 -0.4 -0.2 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 -0.9 -0.1 -0.6 -0.3
stress R2A_PIPES with Cadmium chloride 16 uM -0.3 -0.4 -0.4 -0.4 -0.3
carbon source D-Glucose (C) and 20 AA mix; 30C -0.5 -0.4 -0.2 -0.2 -0.3
stress R2A with Manganese (II) chloride tetrahydrate 0.625 mM -0.3 -0.2 -0.4 -0.4 -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.3 -0.4 -0.2 -0.3 -0.3
stress R2A with bismuth(III) chloride 0.03125 mM +0.6 +0.3 -0.2 +0.3 +0.1
stress R2A with Cobalt chloride 0.0390625 mM +0.2 +0.4 +0.3 +0.3 +0.3
stress R2A with Zinc chloride 0.3125 mM +0.3 +0.3 +0.2 +0.4 +0.3
stress R2A with Nickel (II) chloride 0.3125 mM +0.5 +0.2 +0.3 +0.2 +0.3
r2a_control R2A control +0.2 +0.4 +0.3 +0.3 +0.3
r2a_control R2A control +0.3 +0.2 +0.3 +0.4 +0.4
stress R2A with Manganese (II) chloride tetrahydrate 0.15625 mM +0.3 +0.3 +0.1 +0.5 +0.3
r2a_control R2A control +0.4 +0.2 +0.3 +0.3 +0.3
stress R2A with Other_metal_mix 1 X +0.2 +0.3 +0.4 +0.3 +0.3
stress R2A with FW104 filtrate 0.5 X +0.3 +0.2 +0.4 +0.3 +0.4
pH R2A pH6 +0.4 +0.2 +0.3 +0.3 +0.3
pH R2A pH5 +0.3 +0.4 +0.3 +0.3 +0.3
r2a_control R2A control +0.3 +0.3 +0.2 +0.4 +0.3
r2a_control R2A control +0.3 +0.3 +0.2 +0.4 +0.3
stress R2A with Zinc chloride 0.3125 mM +0.4 +0.2 +0.4 +0.3 +0.3
stress R2A with m-arsenite 0.0390625 mM +0.3 +0.4 +0.3 +0.3 +0.4
pH R2A pH7 +0.3 +0.4 +0.3 +0.3 +0.4
stress R2A with copper (II) chloride 0.3125 mM +0.6 +0.2 +0.2 +0.4 +0.4
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