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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS16990 and LRK54_RS16995 are separated by 52 nucleotides
LRK54_RS16995 and LRK54_RS17000 are separated by 124 nucleotides
LRK54_RS17000 and LRK54_RS17005 are separated by 113 nucleotides
LRK54_RS17005 and LRK54_RS17010 overlap by 7 nucleotides
LRK54_RS16990: LRK54_RS16990 - hypothetical protein, at 3,715,502 to 3,717,523
_RS16990
LRK54_RS16995: LRK54_RS16995 - YdbL family protein, at 3,717,576 to 3,718,181
_RS16995
LRK54_RS17000: LRK54_RS17000 - 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD, at 3,718,306 to 3,719,643
_RS17000
LRK54_RS17005: LRK54_RS17005 - CYTH domain-containing protein, at 3,719,757 to 3,720,278
_RS17005
LRK54_RS17010: LRK54_RS17010 - beta-N-acetylhexosaminidase, at 3,720,272 to 3,721,288
_RS17010
Group
Condition
LRK54
_RS16990
LRK54
_RS16995
LRK54
_RS17000
LRK54
_RS17005
LRK54
_RS17010
carbon source
acetate 20 mM
-0.5
-1.1
-0.3
+0.1
N.D.
carbon source
D-Glucose-6-Phosphate 20 mM
-1.0
-0.6
+0.3
-0.4
N.D.
stress
R2A with SpecU metal mix 1 X
-1.3
-0.4
-0.1
+0.3
N.D.
stress
R2A with SpecU metal mix 1 X
-1.0
-0.4
-0.2
+0.4
N.D.
carbon source
Gly-Glu 20 mM
+0.1
-1.3
-0.3
+0.5
N.D.
stress
R2A with Manganese (II) chloride tetrahydrate 6.25 mM
+0.9
-0.6
-0.6
-0.0
N.D.
stress
R2A with bismuth(III) chloride 0.03125 mM
+0.4
-1.0
-1.0
+1.5
N.D.
stress
R2A with Nickel (II) chloride 0.3125 mM
+0.5
-0.3
-0.8
+0.5
N.D.
stress
R2A with Magnesium sulfate 3.90625 mM
+0.5
-0.2
-0.9
+0.6
N.D.
r2a_control
R2A control
+0.6
-0.2
-0.7
+0.6
N.D.
stress
R2A with Ferric chloride 1.5625 mM
+0.7
-0.3
-0.9
+0.9
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM
+1.0
-0.4
-0.4
+0.2
N.D.
stress
R2A with lithium chloride 15.625 mM
+0.4
-0.1
-0.8
+0.9
N.D.
r2a_control
R2A control
+0.6
-0.1
-0.6
+0.6
N.D.
stress
R2A with Strontium chloride 3.90625 mM
+0.6
-0.2
-0.6
+0.7
N.D.
stress
R2A with Strontium chloride 3.90625 mM
+0.5
-0.3
-0.4
+0.7
N.D.
r2a_control
R2A control
+0.8
-0.0
-0.7
+0.5
N.D.
stress
R2A with mercury (II) chloride 0.009765625 mM
+0.8
+0.1
-0.6
+0.4
N.D.
stress
R2A with sodium bromide 250 mM
+0.7
-0.1
-0.5
+0.7
N.D.
stress
R2A with lithium chloride 15.625 mM
+0.5
+0.0
-0.6
+0.9
N.D.
stress
R2A with Calcium chloride 250 mM
+0.9
-0.3
-0.3
+0.7
N.D.
r2a_control
R2A control
+0.6
+0.2
-0.5
+0.7
N.D.
stress
R2A with Cesium chloride 3.90625 mM
+1.0
-0.3
-0.2
+0.8
N.D.
stress
R2A with Cesium chloride 3.90625 mM
+0.6
+0.1
-0.3
+0.9
N.D.
stress
R2A with Gallium(III)chloride 0.78125 mM
+1.0
-0.2
-0.2
+0.9
N.D.
stress
R2A with silver chloride 1 mM
+1.2
-0.2
-0.4
+0.8
N.D.
stress
R2A with Calcium chloride 250 mM
+1.3
-0.4
-0.1
+0.6
N.D.
stress
R2A with Aluminum chloride 3.125 mM
+2.0
-0.3
-0.3
+0.5
N.D.
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+1.2
+0.0
-0.3
+1.0
N.D.
stress
R2A with silver chloride 1 mM
+1.2
+0.3
-0.2
+0.7
N.D.
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