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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS16785 and LRK54_RS16790 are separated by 25 nucleotides
LRK54_RS16790 and LRK54_RS16795 are separated by 459 nucleotides
LRK54_RS16795 and LRK54_RS16800 overlap by 4 nucleotides
LRK54_RS16800 and LRK54_RS16805 overlap by 4 nucleotides
LRK54_RS16785: LRK54_RS16785 - integrase arm-type DNA-binding domain-containing protein, at 3,677,673 to 3,678,920
_RS16785
LRK54_RS16790: LRK54_RS16790 - hypothetical protein, at 3,678,946 to 3,680,148
_RS16790
LRK54_RS16795: LRK54_RS16795 - hypothetical protein, at 3,680,608 to 3,680,829
_RS16795
LRK54_RS16800: LRK54_RS16800 - hypothetical protein, at 3,680,826 to 3,681,104
_RS16800
LRK54_RS16805: LRK54_RS16805 - hypothetical protein, at 3,681,101 to 3,681,373
_RS16805
Group
Condition
LRK54
_RS16785
LRK54
_RS16790
LRK54
_RS16795
LRK54
_RS16800
LRK54
_RS16805
r2a_control
R2A control
-0.0
-0.4
-0.7
-0.9
-0.6
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM
-0.1
-0.4
-1.0
-0.5
-0.6
stress
R2A with Barium chloride 1.25 mM
-0.1
-0.3
-0.3
-1.1
-0.7
stress
R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM
-0.1
-0.4
-0.2
-1.1
-0.5
r2a_control
R2A control
-0.0
-0.6
-0.5
-0.4
-0.7
stress
R2A with Zinc chloride 0.625 mM
-0.0
-0.5
-0.3
-1.0
-0.4
r2a_control
R2A control
-0.1
-0.4
-0.5
-0.5
-0.6
stress
R2A with lithium chloride 15.625 mM
-0.1
-0.4
-0.3
-0.7
-0.5
r2a_control
R2A control
-0.1
-0.4
-0.5
-0.5
-0.6
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.0
-0.3
-0.5
-0.9
-0.2
stress
R2A with m-arsenite 0.078125 mM
-0.0
-0.5
-0.3
-0.4
-0.7
r2a_control
R2A control
-0.0
-0.4
-0.7
-0.5
-0.5
r2a_control
R2A control
-0.1
-0.4
-0.6
-0.4
-0.5
r2a_control
R2A control
-0.1
-0.5
-0.6
-0.3
-0.5
r2a_control
R2A control
-0.1
-0.3
-0.5
-0.4
-0.5
r2a_control
R2A control
-0.1
-0.4
-0.4
-0.6
-0.4
phage
S5-T2
-0.1
-0.2
-0.8
-0.2
-0.5
r2a_control
R2A control
-0.1
-0.3
-0.6
-0.4
-0.4
r2a_control
R2A control
-0.1
-0.4
-0.6
-0.6
-0.2
r2a_control
R2A control
-0.1
-0.2
-0.5
-0.7
-0.3
r2a_control
R2A control
-0.0
-0.3
-0.6
-0.6
-0.2
r2a_control
R2A control
-0.1
-0.5
-0.7
-0.2
-0.3
stress
R2A with Chloride 250 mM
+0.0
-0.4
-0.4
-0.3
-0.6
stress
R2A with Magnesium sulfate 3.90625 mM
+0.1
-0.3
-0.4
-0.7
-0.4
stress
R2A with Cesium chloride 3.90625 mM
+0.0
-0.3
-0.3
+0.1
-1.0
r2a_control
R2A control
-0.1
-0.3
-0.7
+0.2
-0.6
carbon source
D-Glucose-6-Phosphate 20 mM
+0.1
-0.0
+0.4
-2.0
+0.1
phage
1C-T1
-0.3
+0.1
+0.3
-1.3
+0.3
stress
R2A with Cobalt chloride 0.15625 mM
+0.1
+0.2
+0.4
-0.3
-0.9
phage
1E-T1
+0.0
+0.3
-0.2
+0.7
+0.6
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