Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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Top 30 experiments (either direction), sorted by average fitness

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500 ntLRK54_RS16780 and LRK54_RS16785 are separated by 512 nucleotidesLRK54_RS16785 and LRK54_RS16790 are separated by 25 nucleotidesLRK54_RS16790 and LRK54_RS16795 are separated by 459 nucleotidesLRK54_RS16795 and LRK54_RS16800 overlap by 4 nucleotides LRK54_RS16780: LRK54_RS16780 - DNA polymerase III subunit epsilon, at 3,676,453 to 3,677,160 _RS16780 LRK54_RS16785: LRK54_RS16785 - integrase arm-type DNA-binding domain-containing protein, at 3,677,673 to 3,678,920 _RS16785 LRK54_RS16790: LRK54_RS16790 - hypothetical protein, at 3,678,946 to 3,680,148 _RS16790 LRK54_RS16795: LRK54_RS16795 - hypothetical protein, at 3,680,608 to 3,680,829 _RS16795 LRK54_RS16800: LRK54_RS16800 - hypothetical protein, at 3,680,826 to 3,681,104 _RS16800
Group Condition LRK54_RS16780 LRK54_RS16785 LRK54_RS16790 LRK54_RS16795 LRK54_RS16800
r2a_control R2A control N.D. -0.0 -0.4 -0.7 -0.9
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. -0.1 -0.4 -1.0 -0.5
stress R2A with Barium chloride 1.25 mM N.D. -0.1 -0.3 -0.3 -1.1
stress R2A with Zinc chloride 0.625 mM N.D. -0.0 -0.5 -0.3 -1.0
stress R2A with bismuth(III) chloride 0.03125 mM N.D. -0.0 -0.3 -0.5 -0.9
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM N.D. -0.1 -0.4 -0.2 -1.1
r2a_control R2A control N.D. -0.1 -0.4 -0.6 -0.6
r2a_control R2A control N.D. -0.0 -0.3 -0.6 -0.6
r2a_control R2A control N.D. -0.0 -0.6 -0.5 -0.4
r2a_control R2A control N.D. -0.0 -0.3 -0.6 -0.7
r2a_control R2A control N.D. -0.0 -0.4 -0.7 -0.5
stress R2A with lithium chloride 15.625 mM N.D. -0.1 -0.4 -0.3 -0.7
r2a_control R2A control N.D. -0.1 -0.4 -0.4 -0.6
anaerobic Anaerobic, acetate donor; nitrate electron acceptor N.D. +0.0 -0.2 -0.4 -0.9
r2a_control R2A control N.D. -0.1 -0.2 -0.5 -0.7
r2a_control R2A control N.D. -0.1 -0.5 -0.6 -0.3
r2a_control R2A control N.D. -0.1 -0.4 -0.5 -0.5
r2a_control R2A control N.D. -0.1 -0.4 -0.6 -0.4
carbon source D-Glucose-6-Phosphate 20 mM N.D. +0.1 -0.0 +0.4 -2.0
r2a_control R2A control N.D. -0.1 -0.5 -0.7 -0.2
r2a_control R2A control N.D. -0.1 -0.3 -0.6 -0.4
r2a_control R2A control N.D. -0.1 -0.4 -0.5 -0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM N.D. -0.4 +0.1 -0.0 -1.0
r2a_control R2A control N.D. -0.1 -0.3 -0.5 -0.4
stress R2A with Magnesium sulfate 3.90625 mM N.D. +0.1 -0.3 -0.4 -0.7
phage 1C-T1 N.D. -0.3 +0.1 +0.3 -1.3
stress R2A with Nickel (II) chloride 0.3125 mM N.D. -0.0 -0.4 -0.5 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM N.D. +0.1 +0.1 +0.6 -0.7
phage S3-T1 N.D. -0.3 -0.2 +0.2 +0.7
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x N.D. -0.1 +0.2 +0.2 +1.1
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