Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS16550 and LRK54_RS16555 are separated by 151 nucleotidesLRK54_RS16555 and LRK54_RS16560 are separated by 152 nucleotidesLRK54_RS16560 and LRK54_RS16565 are separated by 46 nucleotidesLRK54_RS16565 and LRK54_RS16570 are separated by 403 nucleotides LRK54_RS16550: LRK54_RS16550 - VOC family protein, at 3,633,020 to 3,633,448 _RS16550 LRK54_RS16555: LRK54_RS16555 - patatin-like phospholipase family protein, at 3,633,600 to 3,634,484 _RS16555 LRK54_RS16560: LRK54_RS16560 - FAD-binding oxidoreductase, at 3,634,637 to 3,636,469 _RS16560 LRK54_RS16565: LRK54_RS16565 - cbb3-type cytochrome c oxidase subunit I, at 3,636,516 to 3,638,813 _RS16565 LRK54_RS16570: LRK54_RS16570 - iron-containing redox enzyme family protein, at 3,639,217 to 3,639,993 _RS16570
Group Condition LRK54_RS16550 LRK54_RS16555 LRK54_RS16560 LRK54_RS16565 LRK54_RS16570
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.8 -0.7 -0.1 +0.0 -0.0
stress R2A with chromate 0.0048828125 mM -1.2 -0.2 -0.0 -0.3 +0.2
phage 3C-T2 -1.2 +0.1 +0.1 -0.2 -0.2
stress R2A with Zinc chloride 0.625 mM -0.7 -0.2 +0.0 +0.5 -0.6
stress R2A with bismuth(III) chloride 0.03125 mM -0.7 -0.2 +0.5 +0.1 -0.5
stress R2A with m-arsenite 0.0390625 mM -0.7 +0.0 +0.1 +0.4 -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.1 +0.1 -0.1 +0.7 -0.4
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM -0.5 -0.2 +0.1 +0.4 -0.6
phage 2E-T1 -0.4 +0.3 -0.4 -0.1 -0.2
phage 4E-T1 -1.0 +0.3 +0.1 -0.0 -0.2
stress R2A with nitrite 50 mM -0.3 +0.0 -0.0 +0.5 -1.0
stress R2A with Selective_ion_mix_1 1 X -0.9 -0.2 +0.2 -0.1 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.1 +0.1 -0.0 +0.3 -0.1
stress R2A with m-arsenite 0.078125 mM -0.6 -0.0 +0.1 +0.7 -0.9
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.2 -0.4 +0.3 -0.5 +0.2
phage 2F-T2 -0.8 +0.5 -0.0 -0.1 -0.3
stress R2A with Cadmium chloride hemipentahydrate 0.01953125 mM -0.6 +0.1 -0.1 +0.3 -0.3
stress R2A with nitrite 25 mM -0.2 -0.1 -0.0 +0.5 -0.7
stress R2A with m-arsenite 0.078125 mM -0.4 +0.2 -0.0 +0.7 -1.0
stress R2A with Zinc chloride 0.625 mM -0.6 -0.0 +0.2 +0.4 -0.5
stress R2A with copper (II) chloride 0.3125 mM +0.2 -0.3 +0.0 +0.2 -0.7
stress R2A with nitrite 25 mM -0.4 -0.1 +0.2 +0.6 -0.7
stress R2A with m-arsenite 0.0390625 mM -0.1 +0.0 -0.0 +0.5 -0.8
stress R2A with Chloride 250 mM +0.4 +0.2 +0.0 -0.6 -0.3
carbon source D-Glucose 20 mM -0.2 +0.1 -0.1 +0.6 -0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.4 -0.1 +0.2 +0.5 -0.3
stress R2A with nitrite 50 mM -0.1 +0.3 +0.1 +0.5 -0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 +0.1 +0.1 +0.8 -0.6
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.4 +0.0 +0.1 +0.3 -0.5
stress R2A with Selective_ion_mix_1 1 X +0.9 -0.4 +0.1 -0.2 +0.2
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