Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS16230 and LRK54_RS16235 are separated by 315 nucleotidesLRK54_RS16235 and LRK54_RS16240 are separated by 93 nucleotidesLRK54_RS16240 and LRK54_RS16245 are separated by 79 nucleotidesLRK54_RS16245 and LRK54_RS16250 overlap by 4 nucleotides LRK54_RS16230: LRK54_RS16230 - imidazolonepropionase, at 3,569,427 to 3,570,689 _RS16230 LRK54_RS16235: LRK54_RS16235 - bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein, at 3,571,005 to 3,572,564 _RS16235 LRK54_RS16240: LRK54_RS16240 - formimidoylglutamate deiminase, at 3,572,658 to 3,574,028 _RS16240 LRK54_RS16245: LRK54_RS16245 - ABC transporter ATP-binding protein, at 3,574,108 to 3,574,839 _RS16245 LRK54_RS16250: LRK54_RS16250 - FtsX-like permease family protein, at 3,574,836 to 3,577,202 _RS16250
Group Condition LRK54_RS16230 LRK54_RS16235 LRK54_RS16240 LRK54_RS16245 LRK54_RS16250
r2a_control R2A control -0.6 -0.4 -1.6 -0.5 -0.4
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.4 -0.5 -0.7 -0.5 -1.2
stress R2A with silver chloride 1 mM -0.5 -0.2 -1.5 -0.9 -0.1
stress R2A with Uranyl acetate 2.5 mM -0.3 -0.3 -1.5 -0.7 -0.3
stress R2A with selenate 31.25 mM -0.7 -0.1 -1.6 -0.5 -0.1
stress R2A with sodium bromide 250 mM -0.4 -0.1 -1.6 -0.6 -0.1
stress R2A with Cesium chloride 3.90625 mM -0.3 -0.0 -1.8 -0.3 -0.2
stress R2A with bismuth(III) chloride 0.03125 mM -0.3 +0.1 -1.3 -0.9 -0.1
stress R2A with Chloride 250 mM -0.4 -0.1 -1.7 -0.5 +0.1
stress R2A with Chloride 250 mM -0.4 -0.1 -1.7 -0.3 -0.0
stress R2A with Calcium chloride 250 mM -0.1 -0.3 -1.2 -0.6 -0.3
stress R2A with Chloride 250 mM -0.1 -0.1 -1.8 -0.4 -0.1
r2a_control R2A control -0.3 -0.2 -1.4 -0.4 -0.2
stress R2A with sulfate 250 mM -0.4 -0.2 -1.4 -0.4 -0.1
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.4 -0.2 -1.6 -0.3 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.6 -0.3 -0.6 -0.4 -0.5
stress R2A with sodium bromide 250 mM -0.4 -0.1 -1.6 -0.3 -0.1
r2a_control R2A control -0.4 -0.1 -1.5 -0.4 +0.0
stress R2A with lead(II) chloride 0.625 mM -0.1 -0.0 -1.5 -0.6 -0.1
stress R2A with Gallium(III)chloride 0.78125 mM +0.0 -0.1 -1.5 -0.7 -0.1
stress R2A with Calcium chloride 250 mM -0.3 -0.2 -1.2 -0.7 -0.0
stress R2A with mercury (II) chloride 0.009765625 mM -0.1 +0.0 -1.5 -0.5 -0.1
stress R2A with ammonium iron(II) sulfate 2.5 mM -0.2 -0.0 -1.3 -0.6 -0.0
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM -0.3 -0.1 -1.2 -0.4 -0.1
stress R2A with Strontium chloride 3.90625 mM -0.3 +0.0 -1.0 -0.7 -0.1
stress R2A with Cesium chloride 3.90625 mM +0.1 -0.0 -1.8 -0.3 +0.0
stress R2A with selenate 31.25 mM -0.2 +0.1 -1.3 -0.6 -0.1
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.4 -0.2 -0.4 -1.2 -0.2
carbon source a-Cyclodextrin 20 mM -0.3 +0.1 -0.3 +2.1 +0.5
carbon source a-Cyclodextrin 20 mM -0.2 +0.1 -0.0 +2.0 +0.4
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