Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS16160 and LRK54_RS16165 are separated by 87 nucleotidesLRK54_RS16165 and LRK54_RS16170 overlap by 4 nucleotidesLRK54_RS16170 and LRK54_RS16175 are separated by 4 nucleotidesLRK54_RS16175 and LRK54_RS16180 are separated by 90 nucleotides LRK54_RS16160: LRK54_RS16160 - DUF1674 domain-containing protein, at 3,556,524 to 3,556,691 _RS16160 LRK54_RS16165: LRK54_RS16165 - succinate dehydrogenase, cytochrome b556 subunit, at 3,556,779 to 3,557,174 _RS16165 LRK54_RS16170: LRK54_RS16170 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 3,557,171 to 3,557,584 _RS16170 LRK54_RS16175: LRK54_RS16175 - succinate dehydrogenase flavoprotein subunit, at 3,557,589 to 3,559,376 _RS16175 LRK54_RS16180: LRK54_RS16180 - succinate dehydrogenase iron-sulfur subunit, at 3,559,467 to 3,560,249 _RS16180
Group Condition LRK54_RS16160 LRK54_RS16165 LRK54_RS16170 LRK54_RS16175 LRK54_RS16180
stress R2A with Nickel (II) chloride 0.15625 mM -4.9 N.D. N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -4.6 N.D. N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -4.4 N.D. N.D. N.D. N.D.
no stress control no stress control -3.1 N.D. N.D. N.D. N.D.
stress R2A with Chloride 250 mM -2.7 N.D. N.D. N.D. N.D.
carbon source a-Cyclodextrin 20 mM -2.5 N.D. N.D. N.D. N.D.
phage 2B-T1 -2.4 N.D. N.D. N.D. N.D.
stress R2A with m-arsenite 0.0390625 mM -2.4 N.D. N.D. N.D. N.D.
pH R2A_PIPES pH 4.25 -2.3 N.D. N.D. N.D. N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -2.3 N.D. N.D. N.D. N.D.
phage 1D-T2 -2.2 N.D. N.D. N.D. N.D.
stress R2A_PIPES with Nickel (II) chloride 424 uM -1.9 N.D. N.D. N.D. N.D.
carbon source casaminos 2 mg/mL -1.8 N.D. N.D. N.D. N.D.
stress R2A with SpecU metal mix 1 X -1.8 N.D. N.D. N.D. N.D.
no stress control no stress control -1.7 N.D. N.D. N.D. N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -1.6 N.D. N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 0.3125 mM -1.6 N.D. N.D. N.D. N.D.
phage 3C-T2 -1.5 N.D. N.D. N.D. N.D.
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -1.5 N.D. N.D. N.D. N.D.
phage 4B-T1 -1.4 N.D. N.D. N.D. N.D.
stress R2A with FW104 filtrate 0.5 X -1.4 N.D. N.D. N.D. N.D.
carbon source D-Glucose (C) and 20 AA mix; 30C -1.4 N.D. N.D. N.D. N.D.
phage 4B-T2 -1.4 N.D. N.D. N.D. N.D.
stress R2A with Other_metal_mix 1 X -1.4 N.D. N.D. N.D. N.D.
r2a_control R2A control -1.4 N.D. N.D. N.D. N.D.
stress R2A with silver chloride 1 mM +1.4 N.D. N.D. N.D. N.D.
stress R2A with silver chloride 1 mM +1.4 N.D. N.D. N.D. N.D.
stress R2A with Cesium chloride 3.90625 mM +1.5 N.D. N.D. N.D. N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; +1.5 N.D. N.D. N.D. N.D.
stress R2A with Cesium chloride 3.90625 mM +2.0 N.D. N.D. N.D. N.D.
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