Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS16105 and LRK54_RS16110 are separated by 115 nucleotidesLRK54_RS16110 and LRK54_RS16115 are separated by 76 nucleotidesLRK54_RS16115 and LRK54_RS16120 are separated by 11 nucleotidesLRK54_RS16120 and LRK54_RS16125 overlap by 14 nucleotides LRK54_RS16105: LRK54_RS16105 - acetoacetyl-CoA reductase, at 3,546,237 to 3,546,998 _RS16105 LRK54_RS16110: LRK54_RS16110 - polyhydroxyalkanoate synthesis repressor PhaR, at 3,547,114 to 3,547,611 _RS16110 LRK54_RS16115: LRK54_RS16115 - DHA2 family efflux MFS transporter permease subunit, at 3,547,688 to 3,549,250 _RS16115 LRK54_RS16120: LRK54_RS16120 - efflux RND transporter periplasmic adaptor subunit, at 3,549,262 to 3,550,470 _RS16120 LRK54_RS16125: LRK54_RS16125 - efflux transporter outer membrane subunit, at 3,550,457 to 3,551,935 _RS16125
Group Condition LRK54_RS16105 LRK54_RS16110 LRK54_RS16115 LRK54_RS16120 LRK54_RS16125
stress R2A with bismuth(III) chloride 0.03125 mM +0.5 -3.8 -0.9 -0.3 -0.5
stress R2A with Calcium chloride 250 mM +0.1 -2.7 -0.7 -0.5 -0.9
pH R2A_PIPES pH 4 -0.1 -2.6 -0.2 -0.4 -0.2
stress R2A with Magnesium sulfate 3.90625 mM +0.1 -3.1 -0.2 -0.1 -0.1
stress R2A with lithium chloride 15.625 mM +0.2 -2.0 -0.6 -0.6 -0.4
stress R2A with Nickel (II) chloride 0.3125 mM +0.1 -3.2 -0.0 +0.2 -0.4
stress R2A with Calcium chloride 125 mM -0.1 -2.1 -0.3 -0.4 -0.5
stress R2A with Magnesium sulfate 3.90625 mM -0.1 -2.5 -0.1 -0.3 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.0 -1.1 -0.6 -0.8 -0.7
stress R2A with Calcium chloride 125 mM +0.1 -1.8 -0.4 -0.7 -0.3
pH R2A_PIPES pH 4 -0.3 -2.3 -0.2 -0.3 +0.0
stress R2A with Cesium chloride 3.90625 mM -0.0 -2.5 -0.2 -0.3 +0.0
stress R2A with Chloride 250 mM +0.2 -2.0 -0.3 -0.5 -0.3
stress R2A with Calcium chloride 250 mM +0.0 -1.8 -0.3 -0.5 -0.4
stress R2A with ammonium iron(II) sulfate 2.5 mM +0.2 -2.5 -0.2 -0.2 -0.2
stress R2A with Uranyl acetate 2.5 mM +0.2 -2.5 -0.1 -0.2 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 -1.0 -0.4 -0.7 -0.7
stress R2A with sulfate 250 mM +0.2 -1.8 -0.4 -0.4 -0.3
stress R2A with sodium bromide 250 mM +0.3 -1.8 -0.4 -0.4 -0.4
stress R2A with Ferric chloride 1.5625 mM +0.3 -2.3 -0.3 -0.1 -0.3
stress R2A with SpecU metal mix 1 X +0.2 -1.6 -0.5 -0.3 -0.4
stress R2A with Chloride 250 mM +0.1 -1.5 -0.4 -0.4 -0.4
stress R2A with Gallium(III)chloride 0.78125 mM +0.4 -2.8 -0.1 -0.2 +0.1
stress R2A with sodium bromide 250 mM +0.1 -1.7 -0.3 -0.4 -0.3
r2a_control R2A control +0.1 -2.2 -0.2 -0.1 -0.1
stress R2A with lithium chloride 15.625 mM +0.2 -2.1 -0.3 -0.0 -0.2
stress R2A with bismuth(III) chloride 0.03125 mM +0.3 -2.1 -0.3 -0.3 -0.0
stress R2A with Chloride 250 mM +0.5 -1.7 -0.3 -0.6 -0.3
r2a_control R2A control +0.3 -2.0 -0.1 -0.1 -0.2
stress R2A with Nickel (II) chloride 0.3125 mM -0.3 -2.4 +0.2 +0.6 +0.3
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