Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 314 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
LRK54_RS15785 and LRK54_RS15790 are separated by 106 nucleotides
LRK54_RS15790 and LRK54_RS15795 are separated by 37 nucleotides
LRK54_RS15795 and LRK54_RS15800 are separated by 61 nucleotides
LRK54_RS15800 and LRK54_RS15805 are separated by 140 nucleotides
LRK54_RS15785: LRK54_RS15785 - cupin domain-containing protein, at 3,475,814 to 3,476,269
_RS15785
LRK54_RS15790: LRK54_RS15790 - nodulation protein NfeD, at 3,476,376 to 3,477,755
_RS15790
LRK54_RS15795: LRK54_RS15795 - slipin family protein, at 3,477,793 to 3,478,569
_RS15795
LRK54_RS15800: LRK54_RS15800 - SAM-dependent methyltransferase, at 3,478,631 to 3,479,452
_RS15800
LRK54_RS15805: LRK54_RS15805 - hypothetical protein, at 3,479,593 to 3,479,859
_RS15805
Group
Condition
LRK54
_RS15785
LRK54
_RS15790
LRK54
_RS15795
LRK54
_RS15800
LRK54
_RS15805
stress
R2A with chromate 0.0048828125 mM
-0.2
-0.3
-1.0
-0.5
+0.6
biofilm assay; biofilm sample
biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM
-0.7
-0.1
-0.3
-0.0
-0.1
biofilm assay; biofilm sample
biofilm; Day2; NLDM;
-0.1
+0.1
-1.0
+0.1
-0.3
stress
R2A with Cobalt chloride 0.15625 mM
-0.1
-0.1
-1.0
+0.1
+0.0
phage
3C-T2
-0.3
-0.1
-0.4
-0.4
+0.2
biofilm assay; biofilm sample
biofilm; Day2; NLDM; Aluminum chloride 1mM
+0.2
-0.0
-0.8
+0.0
-0.4
stress
R2A with Selective_ion_mix_1 1 X
-0.2
-0.1
-0.5
-0.1
-0.0
r2a_control
R2A control
+0.1
-0.0
-0.4
-0.1
-0.4
stress
R2A with Selective_ion_mix_1 1 X
+0.1
-0.1
-0.4
-0.1
-0.3
r2a_control
R2A control
+0.2
-0.1
-0.2
-0.2
-0.4
stress
R2A with Calcium chloride 250 mM
+0.3
-0.1
-0.2
-0.1
-0.5
stress
R2A with copper (II) chloride 0.15625 mM
+0.2
+0.0
-0.5
-0.3
+0.0
stress
R2A with bismuth(III) chloride 0.03125 mM
-0.1
+0.3
-0.5
-0.2
-0.0
r2a_control
R2A control
+0.2
+0.0
-0.2
-0.1
-0.4
biofilm assay; planktonic sample
planktonic; Day2; NLDM; Aluminum chloride 1mM
-0.4
+0.1
-0.2
-0.2
+0.2
stress
R2A with Selective_ion_mix_1 1 X
-0.6
-0.1
+0.2
-0.0
+0.1
stress
R2A with beryllium sulfate tetrahydrate 1.953125 mM
+0.2
-0.1
+0.3
-0.2
-0.6
stress
R2A with Chloride 250 mM
+0.3
+0.0
-0.2
+0.1
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
-0.1
+0.2
-0.3
-0.3
anaerobic
Anaerobic, acetate donor; nitrate electron acceptor
+0.2
+0.1
-0.5
+0.2
-0.1
carbon source
a-Cyclodextrin 20 mM
+0.2
+0.3
+0.0
-0.4
-0.2
stress
R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM
+0.4
-0.1
-0.3
+0.2
-0.2
pH
R2A_PIPES pH 4.25
+0.1
-0.1
+0.6
-0.2
-0.4
stress
R2A with Selective_ion_mix_1 1 X
-0.0
+0.0
-0.4
+0.0
+0.5
stress
R2A with Selective_ion_mix_1 1 X
+0.4
-0.1
-0.4
-0.2
+0.5
stress
R2A with silver chloride 1 mM
+0.5
+0.1
+0.1
-0.1
-0.3
phage
1A-T1
+0.4
+0.0
+0.3
+0.1
-0.4
biofilm assay; planktonic sample
Planktonic; Day4; SGW; pH7
-0.2
-0.1
+0.1
+0.1
+0.5
phage
S3-T2
-0.1
+0.2
+0.5
+0.1
-0.1
phage
2B-T1
+0.2
+0.2
+0.5
+0.1
-0.1
remove
LRK54_RS15785
plot
remove
LRK54_RS15790
plot
remove
LRK54_RS15795
remove
LRK54_RS15800
plot
remove
LRK54_RS15805
plot