Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS15735 and LRK54_RS15740 are separated by 856 nucleotidesLRK54_RS15740 and LRK54_RS15745 are separated by 169 nucleotidesLRK54_RS15745 and LRK54_RS15750 are separated by 66 nucleotidesLRK54_RS15750 and LRK54_RS15755 are separated by 134 nucleotides LRK54_RS15735: LRK54_RS15735 - MarR family transcriptional regulator, at 3,466,283 to 3,466,750 _RS15735 LRK54_RS15740: LRK54_RS15740 - asparaginase domain-containing protein, at 3,467,607 to 3,467,894 _RS15740 LRK54_RS15745: LRK54_RS15745 - lipocalin family protein, at 3,468,064 to 3,468,603 _RS15745 LRK54_RS15750: LRK54_RS15750 - Na+/H+ antiporter, at 3,468,670 to 3,470,310 _RS15750 LRK54_RS15755: LRK54_RS15755 - ABC transporter ATP-binding protein, at 3,470,445 to 3,471,371 _RS15755
Group Condition LRK54_RS15735 LRK54_RS15740 LRK54_RS15745 LRK54_RS15750 LRK54_RS15755
phage 1D-T2 -0.4 -2.2 +0.0 +0.0 -0.0
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.3 -2.2 +0.1 +0.0 +0.2
no phage control No phage control -0.0 -1.3 -0.1 -0.1 -0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.2 -1.6 +0.0 -0.1 -0.1
carbon source a-Cyclodextrin 20 mM -0.6 -0.9 -0.0 -0.1 -0.2
carbon source D-Raffinose 20 mM -0.4 -1.2 -0.1 +0.0 +0.1
stress R2A with Cobalt chloride 0.078125 mM -0.1 -1.4 +0.0 +0.1 -0.1
stress R2A with Selective_ion_mix_1 1 X -0.0 -1.1 +0.0 -0.3 -0.2
phage 3E-T2 -0.5 -0.5 -0.2 +0.1 -0.5
no stress control no stress control -0.0 -1.4 +0.1 +0.1 -0.2
phage S5-T2 +0.2 -1.4 -0.0 -0.0 -0.2
stress R2A with chromate 0.0048828125 mM +0.0 -1.3 -0.1 -0.1 +0.3
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.9 -0.0 -0.4 -0.1 +0.4
phage 4B-T2 +0.4 -0.8 -0.2 +0.1 -0.2
phage 2F-T1 -0.5 -0.8 +0.1 +0.1 +0.4
stress R2A with m-arsenite 0.078125 mM +0.5 -0.9 -0.0 +0.0 -0.1
stress R2A with Calcium chloride 125 mM +0.5 -0.8 +0.1 +0.0 -0.2
phage 1C-T1 -0.0 -1.1 +0.2 +0.3 +0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.8 +0.2 +0.1 -0.0 +0.5
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 +0.7 -0.2 -0.4 -0.1
stress R2A with chromate 0.0048828125 mM +0.4 +0.5 -0.0 -0.2 -0.6
stress R2A with bismuth(III) chloride 0.03125 mM +0.3 +0.8 -0.4 +0.3 -0.8
phage phage 31.1 +0.3 +0.7 -0.1 +0.1 -0.6
phage 2F-T2 -0.2 +0.9 -0.2 +0.2 +0.1
stress R2A with Zinc chloride 0.625 mM +0.1 +1.1 -0.2 -0.3 +0.3
phage 1E-T2 -0.1 +0.9 -0.2 +0.2 +0.3
stress R2A with sodium bromide 250 mM +0.7 +1.0 +0.0 -0.1 -0.3
stress R2A with lead(II) chloride 0.625 mM +0.5 +0.9 +0.2 +0.0 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron electron acceptors +0.3 +1.5 -0.0 -0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +1.6 +0.1 +0.1 -0.2
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