Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS15700 and LRK54_RS15705 are separated by 45 nucleotidesLRK54_RS15705 and LRK54_RS15710 are separated by 125 nucleotidesLRK54_RS15710 and LRK54_RS15715 are separated by 7 nucleotidesLRK54_RS15715 and LRK54_RS15720 overlap by 4 nucleotides LRK54_RS15700: LRK54_RS15700 - DMT family transporter, at 3,459,773 to 3,460,738 _RS15700 LRK54_RS15705: LRK54_RS15705 - sulfur transferase domain-containing protein, at 3,460,784 to 3,461,338 _RS15705 LRK54_RS15710: LRK54_RS15710 - alkylphosphonate utilization protein, at 3,461,464 to 3,461,808 _RS15710 LRK54_RS15715: LRK54_RS15715 - ABC transporter permease subunit, at 3,461,816 to 3,463,324 _RS15715 LRK54_RS15720: LRK54_RS15720 - ATP-binding cassette domain-containing protein, at 3,463,321 to 3,464,088 _RS15720
Group Condition LRK54_RS15700 LRK54_RS15705 LRK54_RS15710 LRK54_RS15715 LRK54_RS15720
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.0 N.D. -0.0 +0.0 -4.1
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.3 N.D. +0.1 -0.0 -3.0
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.0 N.D. -0.1 -0.0 -2.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.0 N.D. +0.1 +0.0 -2.0
stress R2A with mercury (II) chloride 0.009765625 mM -0.0 N.D. -0.0 -0.0 -1.8
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 N.D. -0.0 -0.0 -1.5
stress R2A with Chloride 250 mM +0.1 N.D. -0.2 -0.1 -1.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; -0.1 N.D. +0.1 -0.0 -1.3
stress R2A with Aluminum chloride 3.125 mM -0.2 N.D. +0.0 -0.0 -1.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.0 N.D. -0.0 +0.1 -1.3
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.1 N.D. +0.1 +0.1 -1.2
no phage control No phage control +0.0 N.D. -0.1 +0.1 -1.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 N.D. +0.1 +0.1 -1.2
phage 4E-T1 -0.2 N.D. -0.2 +0.0 +1.0
carbon source a-Cyclodextrin 20 mM +0.4 N.D. -0.3 +0.0 +0.7
carbon source acetate 20 mM -0.3 N.D. +0.0 -0.1 +1.1
phage 4E-T2 -0.1 N.D. -0.2 +0.0 +1.1
stress R2A with Magnesium sulfate 3.90625 mM -0.1 N.D. -0.1 -0.1 +1.2
stress R2A with beryllium sulfate tetrahydrate 1.953125 mM -0.2 N.D. +0.0 -0.1 +1.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.3 N.D. +0.1 +0.4 +0.8
stress R2A with Cobalt chloride 0.15625 mM -0.1 N.D. +0.0 -0.1 +1.3
phage SA-T2 -0.2 N.D. -0.0 +0.1 +1.3
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.2 N.D. -0.1 -0.0 +1.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.0 N.D. +0.0 -0.1 +1.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.4 N.D. -0.1 -0.1 +2.0
stress R2A with arsenate 15.625 mM +0.2 N.D. -0.1 -0.1 +1.4
stress R2A with chromate 0.0048828125 mM +0.4 N.D. -0.1 -0.0 +1.2
stress R2A with Cobalt chloride 0.15625 mM +0.1 N.D. -0.3 -0.1 +1.8
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.1 N.D. -0.0 +0.0 +1.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.3 N.D. -0.2 +0.1 +1.5
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