Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS15675 and LRK54_RS15680 are separated by 157 nucleotidesLRK54_RS15680 and LRK54_RS15685 are separated by 23 nucleotidesLRK54_RS15685 and LRK54_RS15690 are separated by 192 nucleotidesLRK54_RS15690 and LRK54_RS15695 are separated by 107 nucleotides LRK54_RS15675: LRK54_RS15675 - cytochrome oxidase, at 3,455,600 to 3,456,148 _RS15675 LRK54_RS15680: LRK54_RS15680 - OsmC family protein, at 3,456,306 to 3,456,722 _RS15680 LRK54_RS15685: LRK54_RS15685 - acyl-CoA dehydrogenase family protein, at 3,456,746 to 3,458,515 _RS15685 LRK54_RS15690: LRK54_RS15690 - DksA/TraR family C4-type zinc finger protein, at 3,458,708 to 3,458,974 _RS15690 LRK54_RS15695: LRK54_RS15695 - hypothetical protein, at 3,459,082 to 3,459,753 _RS15695
Group Condition LRK54_RS15675 LRK54_RS15680 LRK54_RS15685 LRK54_RS15690 LRK54_RS15695
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.0 -0.0 -0.1 -0.9 -1.2
biofilm assay; planktonic sample planktonic; Day1; NLDM; -0.3 -0.1 -0.4 +0.0 -0.8
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 +0.0 -1.0 -0.4 +0.3 -0.4
stress R2A with Cobalt chloride 0.15625 mM -0.2 -0.5 -0.1 +0.1 -0.4
stress R2A with bismuth(III) chloride 0.03125 mM +0.3 -0.0 -0.0 +0.4 -1.4
phage SA-T1 -0.0 -0.4 -0.2 -0.3 +0.3
stress R2A with chromate 0.0048828125 mM -0.2 -0.4 -0.2 -0.2 +0.4
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.2 +0.2 -0.1 +0.0 -0.9
phage 2F-T1 -0.0 -0.8 +0.1 +0.6 -0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.4 +0.0 +0.3 +0.2 -1.1
stress R2A with Selective_ion_mix_1 1 X +0.3 -0.2 -0.2 -0.2 +0.3
stress R2A with chromate 0.0048828125 mM +0.2 +0.4 -0.3 +0.3 -0.5
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.1 +0.6 +0.2 -0.3 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.4 +0.0 +0.1 +0.2 -0.4
phage 4E-T1 -0.1 +0.2 -0.1 +0.6 -0.2
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.3 -0.1 -0.2 +0.4 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 +0.3 +0.0 +0.6 -0.5
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.2 +0.3 -0.3 +0.0 +0.5
stress R2A_PIPES with Zinc chloride 640 uM -0.0 -0.2 +0.1 +0.4 +0.5
r2a_control R2A control -0.0 -0.2 +0.1 +0.2 +0.7
phage 1A-T1 -0.1 +0.1 +0.3 +0.2 +0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; +0.2 +0.4 -0.2 +0.2 +0.3
phage S3-T2 +0.1 -0.1 +0.1 +0.5 +0.6
phage 3E-T2 +0.0 +0.4 +0.4 +0.2 +0.2
stress R2A_PIPES with Aluminum chloride 1.125 mM -0.1 +0.7 +0.2 +0.2 +0.2
r2a_control R2A control +0.2 +0.2 +0.0 +0.2 +0.7
phage S5-T1 +0.1 +0.4 +0.1 +0.3 +0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.4 +0.5 +0.1 +0.5 +0.1
phage 1E-T2 +0.2 +0.7 -0.0 +0.5 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.3 +0.7 +0.2 +0.5 +0.1
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