Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS15365 and LRK54_RS15370 overlap by 2 nucleotidesLRK54_RS15370 and LRK54_RS15375 are separated by 19 nucleotidesLRK54_RS15375 and LRK54_RS15380 are separated by 294 nucleotidesLRK54_RS15380 and LRK54_RS15385 are separated by 302 nucleotides LRK54_RS15365: LRK54_RS15365 - hypothetical protein, at 3,391,386 to 3,391,544 _RS15365 LRK54_RS15370: LRK54_RS15370 - transposase, at 3,391,543 to 3,391,986 _RS15370 LRK54_RS15375: LRK54_RS15375 - TonB-dependent receptor, at 3,392,006 to 3,394,381 _RS15375 LRK54_RS15380: LRK54_RS15380 - transposase, at 3,394,676 to 3,395,408 _RS15380 LRK54_RS15385: LRK54_RS15385 - phosphosulfolactate synthase, at 3,395,711 to 3,396,544 _RS15385
Group Condition LRK54_RS15365 LRK54_RS15370 LRK54_RS15375 LRK54_RS15380 LRK54_RS15385
r2a_control R2A control -1.3 -0.6 -0.2 -0.3 -0.2
no stress control no stress control -1.5 -0.4 -0.0 -0.1 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -2.5 +0.1 +0.0 +0.2 +0.3
carbon source a-Cyclodextrin 20 mM -1.9 +0.0 -0.1 -0.1 +0.1
stress R2A with nitrite 25 mM -1.0 -0.3 -0.1 -0.1 -0.4
stress R2A with Barium chloride 1.25 mM -1.1 -0.2 -0.1 -0.3 -0.1
stress R2A with Calcium chloride 125 mM -0.7 -0.3 -0.1 -0.2 -0.4
r2a_control R2A control -1.4 +0.0 -0.0 -0.1 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; -2.0 +0.1 +0.1 -0.2 +0.1
stress R2A with lead(II) chloride 0.625 mM -1.0 -0.2 -0.1 -0.3 -0.3
carbon source a-Cyclodextrin 20 mM -1.6 -0.3 +0.2 +0.1 -0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -1.4 -0.2 +0.0 -0.2 +0.1
stress R2A with Barium chloride 1.25 mM -1.2 +0.2 -0.2 -0.2 -0.1
phage S3-T2 -1.6 +0.2 +0.1 +0.0 -0.2
stress R2A with chromate 0.0048828125 mM -1.2 +0.3 +0.1 -0.5 -0.2
stress R2A with selenate 31.25 mM -1.1 +0.2 +0.1 -0.2 -0.3
phage 2A-T1 -1.3 -0.1 +0.1 +0.2 -0.2
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -1.3 +0.4 +0.0 +0.3 -0.0
phage 4B-T2 -1.3 +0.6 -0.2 +0.1 +0.2
stress R2A with Cobalt chloride 0.15625 mM -1.0 +0.5 +0.1 +0.1 -0.2
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.7 -0.1 -0.3 -0.1 -0.6
stress R2A with Cobalt chloride 0.15625 mM -1.3 +0.5 +0.0 +0.1 +0.3
pH R2A pH5 +0.8 -0.2 -0.1 -0.3 -0.4
carbon source D-Glucose (C); 20C +1.1 +0.1 +0.0 -0.1 -0.4
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +1.2 +0.2 +0.1 -0.2 -0.1
phage 4B-T1 +1.2 +0.2 +0.1 -0.0 -0.2
phage 1D-T2 +0.9 +0.4 +0.3 +0.0 -0.2
phage 3E-T2 +1.1 +0.2 -0.1 +0.2 +0.2
phage 2B-T1 +1.1 +0.4 +0.0 +0.2 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +2.0 -0.3 -0.3 +0.2 +0.5
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