Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS15165 and LRK54_RS15170 are separated by 166 nucleotidesLRK54_RS15170 and LRK54_RS15175 are separated by 38 nucleotidesLRK54_RS15175 and LRK54_RS15180 overlap by 4 nucleotidesLRK54_RS15180 and LRK54_RS15185 are separated by 109 nucleotides LRK54_RS15165: LRK54_RS15165 - enoyl-CoA hydratase-related protein, at 3,348,513 to 3,349,295 _RS15165 LRK54_RS15170: LRK54_RS15170 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 3,349,462 to 3,350,184 _RS15170 LRK54_RS15175: LRK54_RS15175 - DUF1289 domain-containing protein, at 3,350,223 to 3,351,004 _RS15175 LRK54_RS15180: LRK54_RS15180 - sulfurtransferase, at 3,351,001 to 3,351,849 _RS15180 LRK54_RS15185: LRK54_RS15185 - enoyl-CoA hydratase/isomerase family protein, at 3,351,959 to 3,352,717 _RS15185
Group Condition LRK54_RS15165 LRK54_RS15170 LRK54_RS15175 LRK54_RS15180 LRK54_RS15185
pH R2A_PIPES pH 4 -0.7 -3.2 -0.3 +0.0 +0.0
pH R2A_PIPES pH 4 -0.8 -2.7 -0.1 -0.1 -0.0
stress R2A with SpecU metal mix 1 X -0.8 -2.5 -0.1 +0.2 +0.2
stress R2A with SpecU metal mix 1 X -0.7 -2.4 -0.1 +0.1 +0.2
carbon source L-Glutamic 20 mM -0.7 -2.0 -0.1 -0.1 +0.2
stress R2A with sodium bromide 250 mM -2.2 -0.7 -0.0 +0.0 +0.3
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.9 -2.3 +0.1 +0.2 +0.3
stress R2A with Uranyl acetate 2.5 mM -2.6 +0.5 -0.4 -0.0 -0.0
stress R2A with Magnesium sulfate 3.90625 mM -2.4 +0.5 -0.1 -0.0 +0.2
r2a_control R2A control -2.4 +0.7 -0.1 +0.0 +0.1
stress R2A with Aluminum chloride 3.125 mM +0.6 -2.4 +0.2 +0.1 -0.0
r2a_control R2A control -2.4 +1.1 -0.2 -0.0 +0.0
stress R2A with Zinc chloride 0.625 mM -1.8 +0.8 -0.4 +0.0 -0.1
stress R2A with bismuth(III) chloride 0.03125 mM -2.2 +1.4 -0.6 -0.0 +0.1
carbon source a-Cyclodextrin 20 mM -0.7 -1.5 +1.1 -0.0 -0.0
r2a_control R2A control -2.1 +1.2 -0.1 +0.1 -0.1
r2a_control R2A control -1.8 +0.9 -0.4 +0.0 +0.2
r2a_control R2A control -1.9 +1.1 -0.1 +0.1 -0.0
r2a_control R2A control -1.6 +1.1 -0.2 -0.1 -0.2
stress R2A with lithium chloride 15.625 mM -2.3 +1.4 +0.1 +0.0 -0.0
r2a_control R2A control -1.8 +1.1 -0.1 +0.0 -0.2
r2a_control R2A control -2.0 +1.1 -0.1 -0.0 +0.1
r2a_control R2A control -1.5 +1.1 -0.3 +0.0 -0.1
r2a_control R2A control -1.8 +1.2 -0.1 +0.0 +0.0
carbon source a-Cyclodextrin 20 mM -0.1 -1.4 +1.4 -0.2 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM -2.0 +1.4 +0.1 +0.0 +0.3
stress R2A with silver chloride 1 mM -1.4 +2.1 -0.4 +0.1 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -1.3 +0.9 +0.9 +0.0 +0.1
stress R2A with silver chloride 1 mM -1.3 +2.2 +0.1 +0.1 -0.0
stress R2A with Manganese (II) chloride tetrahydrate 2.5 mM -0.6 +2.5 +0.4 +0.0 -0.1
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