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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans FW104-10B01
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
LRK54_RS15145 and LRK54_RS15150 are separated by 49 nucleotides
LRK54_RS15150 and LRK54_RS15155 are separated by 33 nucleotides
LRK54_RS15155 and LRK54_RS15160 are separated by 129 nucleotides
LRK54_RS15160 and LRK54_RS15165 are separated by 129 nucleotides
LRK54_RS15145: LRK54_RS15145 - N-acetylmuramoyl-L-alanine amidase, at 3,343,439 to 3,344,947
_RS15145
LRK54_RS15150: LRK54_RS15150 - DNA mismatch repair endonuclease MutL, at 3,344,997 to 3,346,823
_RS15150
LRK54_RS15155: LRK54_RS15155 - DUF1684 domain-containing protein, at 3,346,857 to 3,347,762
_RS15155
LRK54_RS15160: LRK54_RS15160 - hypothetical protein, at 3,347,892 to 3,348,383
_RS15160
LRK54_RS15165: LRK54_RS15165 - enoyl-CoA hydratase-related protein, at 3,348,513 to 3,349,295
_RS15165
Group
Condition
LRK54
_RS15145
LRK54
_RS15150
LRK54
_RS15155
LRK54
_RS15160
LRK54
_RS15165
stress
R2A with Uranyl acetate 2.5 mM
N.D.
+0.0
-0.3
-0.3
-2.6
stress
R2A with Magnesium sulfate 3.90625 mM
N.D.
+0.1
-0.3
-0.2
-2.4
r2a_control
R2A control
N.D.
+0.1
-0.3
-0.3
-2.4
stress
R2A with sodium bromide 250 mM
N.D.
+0.0
-0.3
-0.3
-2.2
r2a_control
R2A control
N.D.
+0.0
-0.2
-0.3
-2.4
stress
R2A with Nickel (II) chloride 0.3125 mM
N.D.
+0.1
-0.5
-0.4
-2.0
r2a_control
R2A control
N.D.
+0.1
-0.4
-0.3
-2.1
stress
R2A with Chloride 250 mM
N.D.
+0.0
-0.2
-0.4
-2.2
stress
R2A with lithium chloride 15.625 mM
N.D.
+0.0
-0.2
-0.2
-2.3
stress
R2A with bismuth(III) chloride 0.03125 mM
N.D.
+0.0
-0.2
-0.2
-2.2
r2a_control
R2A control
N.D.
+0.0
-0.3
-0.2
-2.0
r2a_control
R2A control
N.D.
+0.0
-0.2
-0.3
-2.0
stress
R2A with Barium chloride 1.25 mM
N.D.
+0.1
-0.2
-0.2
-2.0
stress
R2A with nitrite 25 mM
N.D.
+0.0
+0.0
-0.2
-2.2
r2a_control
R2A control
N.D.
+0.0
-0.2
-0.3
-1.8
stress
R2A with selenate 31.25 mM
N.D.
+0.3
-0.2
-0.2
-2.2
r2a_control
R2A control
N.D.
+0.1
-0.2
-0.3
-1.8
stress
R2A with Cesium chloride 3.90625 mM
N.D.
+0.2
-0.3
-0.3
-1.8
r2a_control
R2A control
N.D.
+0.1
-0.2
-0.3
-1.8
stress
R2A with nitrite 25 mM
N.D.
-0.0
-0.0
-0.2
-2.0
r2a_control
R2A control
N.D.
+0.1
-0.2
-0.3
-1.8
stress
R2A with Chloride 250 mM
N.D.
+0.1
-0.3
-0.3
-1.7
r2a_control
R2A control
N.D.
+0.1
-0.1
-0.3
-1.9
r2a_control
R2A control
N.D.
+0.1
-0.2
-0.1
-1.8
r2a_control
R2A control
N.D.
+0.2
-0.4
-0.3
-1.6
r2a_control
R2A control
N.D.
+0.1
-0.1
-0.2
-1.8
r2a_control
R2A control
N.D.
+0.1
-0.2
-0.3
-1.6
r2a_control
R2A control
N.D.
+0.1
-0.3
-0.3
-1.5
stress
R2A with nitrate 250 mM
N.D.
+0.2
-0.0
-0.2
-1.9
anaerobic
Anaerobic, acetate donor; nitrate and iron electron acceptors
N.D.
+0.1
+0.3
-0.0
-1.9
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