Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS14785 and LRK54_RS14790 are separated by 18 nucleotidesLRK54_RS14790 and LRK54_RS14795 are separated by 151 nucleotidesLRK54_RS14795 and LRK54_RS14800 are separated by 57 nucleotidesLRK54_RS14800 and LRK54_RS14805 are separated by 123 nucleotides LRK54_RS14785: LRK54_RS14785 - NADH:flavin oxidoreductase/NADH oxidase, at 3,270,484 to 3,271,545 _RS14785 LRK54_RS14790: LRK54_RS14790 - pirin family protein, at 3,271,564 to 3,272,439 _RS14790 LRK54_RS14795: LRK54_RS14795 - DUF962 domain-containing protein, at 3,272,591 to 3,272,893 _RS14795 LRK54_RS14800: LRK54_RS14800 - cytochrome c, at 3,272,951 to 3,273,340 _RS14800 LRK54_RS14805: LRK54_RS14805 - tRNA threonylcarbamoyladenosine dehydratase, at 3,273,464 to 3,274,252 _RS14805
Group Condition LRK54_RS14785 LRK54_RS14790 LRK54_RS14795 LRK54_RS14800 LRK54_RS14805
stress R2A_PIPES with Nickel (II) chloride 424 uM -0.8 -0.1 +0.2 -3.5 -0.1
stress R2A with chromate 0.0048828125 mM -0.4 -1.0 -0.1 -1.9 -0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.5 +0.1 -0.4 -3.5 +0.1
stress R2A with chromate 0.0048828125 mM +0.0 -0.4 -0.4 -1.8 -0.5
phage 1C-T2 -0.9 -0.1 +0.0 -1.6 -0.2
phage 2A-T2 -0.9 -0.7 +0.1 -0.7 -0.2
phage phage 31.1 +0.0 +0.4 -0.0 -3.1 +0.4
stress R2A with copper (II) chloride 0.3125 mM -0.1 -0.3 -0.0 -2.0 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.2 -0.0 -0.2 -0.9 -1.2
stress R2A with nitrite 25 mM -0.3 +0.0 -0.0 -1.8 +0.2
stress R2A with Zinc chloride 0.625 mM -0.6 -0.0 -0.1 -1.5 +0.4
stress R2A with Aluminum chloride 3.125 mM -0.1 -0.0 -0.1 -1.9 +0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.2 -0.5 +0.2 -1.5 +0.1
phage 3E-T2 +0.2 +0.0 -0.2 -1.7 -0.0
stress R2A with Other_metal_mix 1 X -0.5 +0.2 -0.0 -1.5 +0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.5 -0.4 -0.1 -1.7 -0.1
stress R2A with nitrate 250 mM -0.1 -0.2 -0.1 -1.5 +0.3
stress R2A with nitrite 50 mM +0.1 +0.1 -0.1 -2.0 +0.4
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -1.1 -0.2 +0.4 +0.1 -0.6
phage 1E-T2 +0.8 -0.0 +0.1 -1.7 -0.1
no stress control no stress control -1.2 -0.1 +0.1 +0.7 +0.3
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.2 -0.4 -0.2 -0.3 +1.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -1.1 +0.2 -0.0 +1.0 +0.0
stress R2A with bismuth(III) chloride 0.03125 mM -0.9 -0.4 +0.1 +1.0 +0.3
phage 2E-T2 +0.3 -0.6 -0.3 +1.3 -0.0
stress R2A with Selective_ion_mix_1 1 X +0.7 -0.3 -0.2 +0.9 -0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; -0.7 -0.0 +0.1 +1.2 +0.3
stress R2A with Magnesium sulfate 3.90625 mM -0.6 -0.1 -0.0 +1.0 +0.7
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.5 -0.5 +0.4 +1.6 +0.3
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.6 +0.1 +0.1 +1.4 +0.1
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