Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS14725 and LRK54_RS14730 are separated by 228 nucleotidesLRK54_RS14730 and LRK54_RS14735 overlap by 4 nucleotidesLRK54_RS14735 and LRK54_RS14740 are separated by 99 nucleotidesLRK54_RS14740 and LRK54_RS14745 are separated by 149 nucleotides LRK54_RS14725: LRK54_RS14725 - MetQ/NlpA family ABC transporter substrate-binding protein, at 3,260,908 to 3,261,702 _RS14725 LRK54_RS14730: LRK54_RS14730 - ABC transporter permease, at 3,261,931 to 3,262,608 _RS14730 LRK54_RS14735: LRK54_RS14735 - methionine ABC transporter ATP-binding protein, at 3,262,605 to 3,263,615 _RS14735 LRK54_RS14740: LRK54_RS14740 - glutathione peroxidase, at 3,263,715 to 3,264,200 _RS14740 LRK54_RS14745: LRK54_RS14745 - peptidylprolyl isomerase, at 3,264,350 to 3,264,832 _RS14745
Group Condition LRK54_RS14725 LRK54_RS14730 LRK54_RS14735 LRK54_RS14740 LRK54_RS14745
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 -0.5 -0.5 -1.0 -1.4 -0.5
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -1.1 -1.1 -1.2 -0.1 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.15625 mM -0.3 -0.9 -1.0 -0.2 -0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -0.7 -1.1 -0.7 -0.0 -0.0
stress R2A with Chromium(III) Chloride Hexahydrate 0.078125 mM -0.7 -0.6 -0.8 -0.1 -0.0
stress R2A with Chloride 250 mM -0.4 -0.4 -0.7 -0.8 -0.0
stress R2A with m-arsenite 0.0390625 mM -0.5 -0.6 -0.5 -0.3 -0.2
stress R2A with m-arsenite 0.0390625 mM -0.6 -0.4 -0.4 -0.3 -0.3
pH R2A pH7 -0.6 -0.5 -0.5 -0.3 -0.2
stress R2A with sodium bromide 250 mM -0.2 -0.7 -0.4 -0.6 -0.1
stress R2A with Uranyl acetate 2.5 mM -0.3 -0.2 -0.6 -0.3 -0.5
stress R2A with nitrite 50 mM -0.4 -0.4 -0.4 -0.4 -0.3
pH R2A pH5 -0.4 -0.5 -0.5 -0.2 -0.2
stress R2A with lithium chloride 15.625 mM -0.4 -0.5 -0.4 -0.2 -0.3
pH R2A_PIPES pH 4.25 -0.7 -0.7 +0.1 -0.4 -0.0
pH R2A pH5 -0.6 -0.4 -0.4 -0.3 -0.1
stress R2A with Nickel (II) chloride 0.15625 mM -0.1 -0.7 -0.5 -0.3 -0.1
stress R2A with nitrite 25 mM -0.9 -0.1 -0.1 -0.5 -0.1
pH R2A pH6 -0.3 -0.4 -0.3 -0.4 -0.3
stress R2A with lithium chloride 15.625 mM -0.4 -0.5 -0.3 -0.7 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.4 -0.1 -0.7 -0.5 +0.2
stress R2A with silver chloride 1 mM +0.3 -0.3 -0.7 -0.8 -0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.4 -0.5 -0.4 -0.3 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM -0.1 -0.5 -0.5 -0.8 +0.7
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM -0.7 +0.1 +0.1 -0.7 -0.2
phage 1D-T2 -0.3 -0.3 +0.6 -0.6 -0.1
no stress control no stress control -0.6 -0.2 -0.2 -0.2 +0.6
stress R2A with Cobalt chloride 0.15625 mM +0.9 +0.4 +0.3 +0.2 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.8 +0.9 +0.8 -0.2 -0.2
stress R2A with Cobalt chloride 0.15625 mM +0.7 +0.6 +0.7 +0.2 +0.0
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