Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS14625 and LRK54_RS14630 are separated by 82 nucleotidesLRK54_RS14630 and LRK54_RS14635 are separated by 27 nucleotidesLRK54_RS14635 and LRK54_RS14640 are separated by 92 nucleotidesLRK54_RS14640 and LRK54_RS14645 are separated by 0 nucleotides LRK54_RS14625: LRK54_RS14625 - peptidase S10, at 3,243,048 to 3,244,553 _RS14625 LRK54_RS14630: LRK54_RS14630 - NAD(P)H-dependent oxidoreductase, at 3,244,636 to 3,245,262 _RS14630 LRK54_RS14635: LRK54_RS14635 - LysE family translocator, at 3,245,290 to 3,245,886 _RS14635 LRK54_RS14640: LRK54_RS14640 - LysR substrate-binding domain-containing protein, at 3,245,979 to 3,246,884 _RS14640 LRK54_RS14645: LRK54_RS14645 - thioredoxin TrxC, at 3,246,885 to 3,247,328 _RS14645
Group Condition LRK54_RS14625 LRK54_RS14630 LRK54_RS14635 LRK54_RS14640 LRK54_RS14645
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM +0.1 -0.2 -0.0 -0.5 N.D.
stress R2A with chromate 0.0048828125 mM +0.1 -0.0 -0.1 -0.7 N.D.
stress R2A with nitrite 25 mM -0.0 +0.1 -0.6 -0.2 N.D.
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.0 +0.1 -0.3 -0.3 N.D.
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.2 -0.3 -0.5 +0.2 N.D.
stress R2A with nitrate 250 mM -0.2 +0.0 -0.4 +0.1 N.D.
pH R2A pH6 -0.0 +0.2 -0.4 -0.1 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.2 +0.1 +0.2 -0.4 N.D.
phage 2F-T1 +0.0 -0.2 +0.3 -0.3 N.D.
carbon source a-Cyclodextrin 20 mM -0.0 +0.4 -0.1 -0.5 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.0 +0.2 +0.2 -0.4 N.D.
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.1 -0.4 +0.1 +0.3 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.0 -0.2 +0.6 -0.3 N.D.
stress R2A with Cobalt chloride 0.15625 mM +0.2 +0.3 +0.1 -0.4 N.D.
r2a_control R2A control -0.0 +0.2 -0.3 +0.3 N.D.
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.0 -0.2 +0.8 -0.2 N.D.
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 +0.2 -0.1 +0.4 N.D.
stress R2A with Nickel (II) chloride 0.3125 mM -0.1 +0.3 +0.4 -0.0 N.D.
phage 2A-T2 +0.1 +0.2 +0.4 -0.2 N.D.
phage S5-T1 +0.1 -0.1 +0.4 +0.3 N.D.
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.1 +0.4 -0.1 +0.3 N.D.
stress R2A with bismuth(III) chloride 0.03125 mM +0.2 -0.0 -0.1 +0.6 N.D.
no stress control no stress control +0.1 +0.3 +0.4 -0.0 N.D.
stress R2A with Cobalt chloride 0.15625 mM +0.2 +0.0 +0.1 +0.4 N.D.
phage 3E-T1 +0.1 +0.3 +0.3 +0.2 N.D.
phage 4B-T2 +0.1 +0.2 +0.5 +0.1 N.D.
phage 4B-T1 +0.2 +0.1 +0.4 +0.2 N.D.
phage phage 31.1 +0.2 +0.4 +0.3 +0.2 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +0.3 +0.7 +0.1 N.D.
phage 4E-T2 +0.2 +0.4 +0.8 +0.3 N.D.
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