Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 314 experiments or choose conditions or try the comparative fitness browser

500 ntLRK54_RS14430 and LRK54_RS14435 are separated by 35 nucleotidesLRK54_RS14435 and LRK54_RS14440 are separated by 63 nucleotidesLRK54_RS14440 and LRK54_RS14445 are separated by 106 nucleotidesLRK54_RS14445 and LRK54_RS14450 are separated by 41 nucleotides LRK54_RS14430: LRK54_RS14430 - isocitrate lyase/phosphoenolpyruvate mutase family protein, at 3,209,756 to 3,210,592 _RS14430 LRK54_RS14435: LRK54_RS14435 - carboxymuconolactone decarboxylase family protein, at 3,210,628 to 3,211,089 _RS14435 LRK54_RS14440: LRK54_RS14440 - DNA-3-methyladenine glycosylase, at 3,211,153 to 3,211,743 _RS14440 LRK54_RS14445: LRK54_RS14445 - putative cation transport regulator ChaB, at 3,211,850 to 3,212,077 _RS14445 LRK54_RS14450: LRK54_RS14450 - hypothetical protein, at 3,212,119 to 3,212,619 _RS14450
Group Condition LRK54_RS14430 LRK54_RS14435 LRK54_RS14440 LRK54_RS14445 LRK54_RS14450
phage 2A-T2 -0.2 -0.0 -0.0 -1.0 -1.7
phage 3E-T2 +0.1 +0.0 -0.1 +0.1 -2.5
phage 3B-T1 -0.6 -0.2 -0.3 +0.1 -1.2
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 -0.2 -0.4 -0.4 -0.8
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.6 -0.2 -0.3 -0.4 -0.3
phage 1E-T2 -0.0 +0.1 -0.4 -0.3 -0.9
phage SA-T2 -0.5 -0.2 -0.1 +0.1 -0.9
phage 1B-T1 -0.4 -0.0 -0.3 -0.3 -0.5
phage 2F-T1 -0.9 -0.1 -0.1 +0.1 -0.5
biofilm assay; biofilm sample biofilm; Day1; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.2 +0.1 -0.3 -0.1 -0.8
phage 1D-T2 -0.1 -0.2 -0.3 +0.1 -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.5 -0.0 -0.5 -0.6 -0.4
phage 1A-T1 -0.2 -0.1 -0.3 +0.3 -0.7
stress R2A with Cadmium chloride hemipentahydrate 0.01953125 mM +0.1 +0.0 +0.0 +0.1 -1.2
stress R2A with Cesium chloride 3.90625 mM +0.3 -0.0 -0.0 -0.1 -1.0
phage 1C-T1 -0.3 -0.0 +0.0 +0.4 -0.9
carbon source a-Cyclodextrin 20 mM +0.2 -0.0 +0.2 -0.1 -1.0
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.2 +0.1 +0.4 +0.1 -0.8
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.4 -0.5 +0.1 +0.5 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM +0.0 +0.2 +0.1 +0.6 -1.1
phage 2F-T2 -0.2 +0.1 +0.0 +0.6 -0.7
carbon source D-Glucose-6-Phosphate 20 mM +0.6 -0.1 +0.3 -0.2 -0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 +0.2 +0.4 -0.6 -0.4
stress R2A with chromate 0.0048828125 mM -0.0 +0.1 +0.2 -1.2 +0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; +0.1 +0.4 +0.2 +0.3 -0.9
stress R2A with Selective_ion_mix_1 1 X +0.0 +0.1 +0.2 -0.6 +0.8
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.3 +0.3 +0.4 +0.2 +0.3
stress R2A with bismuth(III) chloride 0.03125 mM +0.4 -0.3 +0.4 +0.6 -0.0
anaerobic Anaerobic, acetate donor; nitrate electron acceptor +0.5 -0.2 +0.3 -0.2 +0.9
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM +0.4 +0.2 -0.0 +0.3 +0.8
remove
LRK54_RS14430
plot
remove
LRK54_RS14435
plot
remove
LRK54_RS14440
remove
LRK54_RS14445
plot
remove
LRK54_RS14450
plot