Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS14410 and LRK54_RS14415 are separated by 12 nucleotidesLRK54_RS14415 and LRK54_RS14420 are separated by 247 nucleotidesLRK54_RS14420 and LRK54_RS14425 are separated by 35 nucleotidesLRK54_RS14425 and LRK54_RS14430 are separated by 133 nucleotides LRK54_RS14410: LRK54_RS14410 - DUF190 domain-containing protein, at 3,206,194 to 3,206,532 _RS14410 LRK54_RS14415: LRK54_RS14415 - fluoride efflux transporter CrcB, at 3,206,545 to 3,206,931 _RS14415 LRK54_RS14420: LRK54_RS14420 - multidrug effflux MFS transporter, at 3,207,179 to 3,208,444 _RS14420 LRK54_RS14425: LRK54_RS14425 - DUF2235 domain-containing protein, at 3,208,480 to 3,209,622 _RS14425 LRK54_RS14430: LRK54_RS14430 - isocitrate lyase/phosphoenolpyruvate mutase family protein, at 3,209,756 to 3,210,592 _RS14430
Group Condition LRK54_RS14410 LRK54_RS14415 LRK54_RS14420 LRK54_RS14425 LRK54_RS14430
stress R2A with Nickel (II) chloride 0.3125 mM +0.0 -0.8 -1.0 -0.0 +0.2
phage 2F-T1 -0.3 -0.2 +0.0 -0.2 -0.9
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.2 -0.1 -0.3 -0.3 -0.2
stress R2A with selenate 31.25 mM -0.3 -0.2 -0.3 -0.1 -0.1
biofilm assay; planktonic sample Planktonic; Day2; SGW; pH7 -0.0 -0.1 -0.2 -0.2 -0.6
phage 3B-T1 +0.0 -0.1 -0.1 -0.1 -0.6
stress R2A with FW104 filtrate 0.5 X +0.0 -1.3 -0.1 +0.1 +0.2
stress R2A with FW104 filtrate 0.5 X -0.1 -1.1 +0.0 +0.1 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.4 +0.1 -0.2 +0.1 -0.4
phage 3E-T2 +0.1 -0.4 -0.3 -0.2 +0.1
stress R2A with FW104 filtrate 0.5 X -0.0 -0.9 +0.0 +0.1 +0.1
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.2 -0.2 -0.5 +0.1 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.4 -0.2 -0.3 -0.1 +0.3
stress R2A with Nickel (II) chloride 0.3125 mM -0.3 -0.2 -0.5 +0.3 +0.0
stress R2A with Uranyl acetate 2.5 mM -0.3 -0.4 -0.2 +0.0 +0.3
stress R2A with Cobalt chloride 0.15625 mM +0.3 -0.4 -0.2 -0.0 -0.1
stress R2A_PIPES with Cobalt chloride 256 uM -0.1 +0.3 -0.0 +0.0 -0.5
stress R2A with Nickel (II) chloride 0.625 mM +0.0 +0.3 -0.6 -0.0 -0.1
stress R2A with Nickel (II) chloride 0.625 mM +0.1 +0.2 -0.7 +0.0 +0.1
stress R2A with Cobalt chloride 0.15625 mM +0.4 -0.2 -0.3 -0.1 +0.1
anaerobic Anaerobic, acetate donor; nitrate electron acceptor -0.2 -0.3 -0.1 +0.1 +0.5
no stress control no stress control -0.1 +0.3 +0.1 +0.2 -0.4
biofilm assay; planktonic sample planktonic; Day2; NLDM; Aluminum chloride 1mM +0.4 -0.5 -0.0 +0.1 +0.1
stress R2A_PIPES with Nickel (II) chloride 424 uM +0.3 +0.4 -0.1 +0.1 -0.4
pH R2A pH6 +0.3 -0.4 -0.0 +0.1 +0.2
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 -0.3 +0.2 +0.3 +0.2
carbon source D-Glucose-6-Phosphate 20 mM -0.2 -0.1 -0.1 +0.2 +0.6
stress R2A with bismuth(III) chloride 0.03125 mM +0.4 -0.5 -0.2 +0.2 +0.4
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.2 +1.0 +0.1 -0.1 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.3 +0.1 +0.4 -0.1 +0.5
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