Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS14340 and LRK54_RS14345 are separated by 230 nucleotidesLRK54_RS14345 and LRK54_RS14350 are separated by 37 nucleotidesLRK54_RS14350 and LRK54_RS14355 are separated by 135 nucleotidesLRK54_RS14355 and LRK54_RS14360 are separated by 270 nucleotides LRK54_RS14340: LRK54_RS14340 - biotin--protein ligase, at 3,193,355 to 3,193,645 _RS14340 LRK54_RS14345: LRK54_RS14345 - SDR family oxidoreductase, at 3,193,876 to 3,194,610 _RS14345 LRK54_RS14350: LRK54_RS14350 - NAD(P)-binding domain-containing protein, at 3,194,648 to 3,195,256 _RS14350 LRK54_RS14355: LRK54_RS14355 - LysR family transcriptional regulator, at 3,195,392 to 3,196,282 _RS14355 LRK54_RS14360: LRK54_RS14360 - hypothetical protein, at 3,196,553 to 3,196,987 _RS14360
Group Condition LRK54_RS14340 LRK54_RS14345 LRK54_RS14350 LRK54_RS14355 LRK54_RS14360
stress R2A with bismuth(III) chloride 0.03125 mM -0.9 -1.1 -0.2 +0.2 -0.3
stress R2A with m-arsenite 0.078125 mM -1.5 +0.2 -0.3 -0.1 +0.1
stress R2A with chromate 0.0048828125 mM -0.3 +0.6 -1.5 -0.2 -0.2
stress R2A with lithium chloride 15.625 mM -0.5 -0.7 -0.3 +0.0 +0.1
stress R2A with nitrate 250 mM -0.4 -0.4 -0.7 +0.0 +0.2
stress R2A with Chloride 250 mM -0.5 -0.4 -0.2 -0.2 -0.0
stress R2A with Barium chloride 1.25 mM -0.5 -0.3 -0.4 -0.0 +0.0
stress R2A with nitrite 25 mM -0.3 +0.1 -0.8 -0.3 +0.2
no phage control No phage control -0.3 -0.4 -0.3 -0.3 +0.2
r2a_control R2A control -0.3 -0.4 -0.6 +0.1 +0.1
stress R2A with Cesium chloride 3.90625 mM -0.8 -0.3 -0.1 -0.0 +0.1
r2a_control R2A control -0.4 -0.6 -0.3 +0.1 +0.2
stress R2A with m-arsenite 0.078125 mM -1.6 +0.2 +0.2 -0.0 +0.2
stress R2A with Chromium(III) Chloride Hexahydrate 0.09765625 mM -0.6 -0.5 +0.1 +0.1 -0.1
stress R2A with Barium chloride 1.25 mM -0.5 -0.2 -0.6 +0.1 +0.2
phage 2A-T1 -0.4 -0.4 -0.2 -0.1 +0.2
stress R2A with Chloride 250 mM -0.5 +0.3 -0.6 -0.1 +0.1
stress R2A with Nickel (II) chloride 0.3125 mM -0.5 +0.2 -0.4 -0.2 -0.0
stress R2A with Uranyl acetate 2.5 mM -0.4 -0.5 -0.2 +0.2 +0.1
phage 1A-T1 -0.3 -0.5 +0.2 -0.3 +0.0
stress R2A with Calcium chloride 250 mM -0.8 +0.2 -0.3 +0.1 +0.2
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x -0.4 -0.9 +0.5 +0.1 +0.1
stress R2A with Selective_ion_mix_1 1 X -0.3 +0.5 -0.4 -0.3 +0.1
biofilm assay; planktonic sample planktonic; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.4 -0.7 +0.7 +0.3 +0.0
phage S3-T2 -0.4 +0.5 +0.3 -0.1 -0.0
no stress control no stress control +0.2 +0.4 -0.5 +0.2 +0.2
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.2 +0.2 +0.5 -0.4 +0.1
biofilm assay; biofilm sample biofilm; Day2; NLDM; -0.1 +0.5 +0.6 -0.1 -0.2
stress R2A with Cobalt chloride 0.15625 mM +0.5 +0.4 +0.1 +0.2 -0.3
phage 4E-T1 -0.2 +0.8 +0.7 +0.1 +0.1
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