Fitness for 5 genes in Rhodanobacter denitrificans FW104-10B01

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500 ntLRK54_RS14320 and LRK54_RS14325 overlap by 4 nucleotidesLRK54_RS14325 and LRK54_RS14330 are separated by 150 nucleotidesLRK54_RS14330 and LRK54_RS14335 are separated by 40 nucleotidesLRK54_RS14335 and LRK54_RS14340 overlap by 4 nucleotides LRK54_RS14320: LRK54_RS14320 - penicillin acylase family protein, at 3,188,721 to 3,191,135 _RS14320 LRK54_RS14325: LRK54_RS14325 - phosphodiester glycosidase family protein, at 3,191,132 to 3,191,902 _RS14325 LRK54_RS14330: LRK54_RS14330 - 8-oxo-dGTP diphosphatase, at 3,192,053 to 3,192,541 _RS14330 LRK54_RS14335: LRK54_RS14335 - lipoate--protein ligase family protein, at 3,192,582 to 3,193,358 _RS14335 LRK54_RS14340: LRK54_RS14340 - biotin--protein ligase, at 3,193,355 to 3,193,645 _RS14340
Group Condition LRK54_RS14320 LRK54_RS14325 LRK54_RS14330 LRK54_RS14335 LRK54_RS14340
stress R2A with m-arsenite 0.078125 mM +0.1 -0.2 -0.4 -1.5 -1.6
stress R2A with m-arsenite 0.078125 mM +0.2 -0.1 -0.5 -1.2 -1.5
stress R2A with Nickel (II) chloride 0.3125 mM -0.0 -0.1 -1.2 +0.1 -0.3
biofilm assay; planktonic sample Planktonic; Day4; SGW; pH7 +0.1 -0.2 -0.5 -0.9 +0.2
stress R2A with nitrite 25 mM +0.0 -0.2 -0.7 +0.1 -0.4
stress R2A with nitrite 50 mM +0.2 -0.2 -0.3 -0.2 -0.5
stress R2A with silver chloride 1 mM +0.3 -0.3 -0.0 -0.2 -0.8
stress R2A with Cadmium chloride hemipentahydrate 0.0390625 mM +0.3 -0.5 -0.2 -0.3 -0.4
stress R2A with Calcium chloride 250 mM +0.3 +0.3 -0.2 -0.5 -0.8
stress R2A with Calcium chloride 250 mM +0.2 +0.2 -0.3 -0.5 -0.4
r2a_control R2A control +0.3 +0.1 -0.2 -0.6 -0.4
stress R2A with bismuth(III) chloride 0.03125 mM +0.3 +0.3 +0.0 -0.5 -0.9
stress R2A_PIPES with Metal_ion_mix_sitestressplate 2 x +0.5 -0.0 -0.2 -0.7 -0.4
stress R2A with mercury (II) chloride 0.009765625 mM +0.4 -0.1 -0.2 -0.3 -0.6
stress R2A with Magnesium sulfate 3.90625 mM +0.2 +0.2 -0.2 -0.3 -0.6
r2a_control R2A control +0.2 +0.3 -0.3 -0.2 -0.6
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.4 +0.4 -0.7 -0.1 +0.2
stress R2A_PIPES with Aluminum chloride 1.125 mM +0.2 -0.5 +0.3 -0.6 +0.2
stress R2A with Cesium chloride 3.90625 mM +0.3 +0.2 -0.1 -0.0 -0.8
carbon source a-Cyclodextrin 20 mM -0.1 -1.0 -0.2 +0.4 +0.6
carbon source a-Cyclodextrin 20 mM -0.1 -0.7 -0.3 +0.5 +0.5
phage 1C-T2 +0.2 +0.2 +0.3 -0.2 -0.6
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM +0.0 +0.7 -0.6 -0.1 -0.0
biofilm assay; biofilm sample biofilm; Day2; NLDM; Manganese (II) chloride tetrahydrate 10mM -0.1 -0.0 -0.6 +0.5 +0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM -0.1 +0.6 -0.6 -0.0 +0.4
stress R2A with chromate 0.0048828125 mM -0.1 -0.1 +0.3 +0.7 -0.3
biofilm assay; biofilm sample biofilm; Day2; NLDM; Aluminum chloride 1mM +0.2 +0.6 -0.5 +0.2 +0.2
stress R2A with Manganese (II) chloride tetrahydrate 6.25 mM -0.2 +0.9 -0.3 +0.1 -0.0
stress R2A with Cobalt chloride 0.15625 mM -0.3 -0.2 +0.2 +0.8 +0.5
stress R2A with Cobalt chloride 0.15625 mM -0.3 +0.2 -0.0 +1.1 +0.6
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